Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AB4K17_RS06055 Genome accession   NZ_CP162505
Coordinates   1164579..1165262 (+) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus cereus strain DJ29     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1159579..1170262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4K17_RS06035 (AB4K17_06035) - 1160640..1162286 (+) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -
  AB4K17_RS06040 (AB4K17_06040) - 1162317..1162520 (-) 204 WP_000559971.1 hypothetical protein -
  AB4K17_RS06045 (AB4K17_06045) spx 1163114..1163509 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AB4K17_RS06050 (AB4K17_06050) - 1163559..1164233 (-) 675 WP_000362607.1 TerC family protein -
  AB4K17_RS06055 (AB4K17_06055) mecA 1164579..1165262 (+) 684 WP_000350713.1 adaptor protein MecA Regulator
  AB4K17_RS06060 (AB4K17_06060) - 1165335..1166879 (+) 1545 WP_000799194.1 cardiolipin synthase -
  AB4K17_RS06065 (AB4K17_06065) - 1166960..1168204 (+) 1245 WP_000628316.1 competence protein CoiA -
  AB4K17_RS06070 (AB4K17_06070) pepF 1168256..1170082 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=1026644 AB4K17_RS06055 WP_000350713.1 1164579..1165262(+) (mecA) [Bacillus cereus strain DJ29]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1026644 AB4K17_RS06055 WP_000350713.1 1164579..1165262(+) (mecA) [Bacillus cereus strain DJ29]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment