Detailed information NTG1026641

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECTO60_RS23740
• Genome accession: NZ_LS992168
• Coordinates: 4777154..4778179 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate Escherichia coli str. TO60
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4772154..4783179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECTO60_RS23720 (ECTO60_04695)	metJ	4773339..4773656 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ECTO60_RS23725 (ECTO60_04696)	yiiX	4773716..4774324 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ECTO60_RS23730 (ECTO60_04697)	rpmE	4774385..4774597 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ECTO60_RS23735 (ECTO60_04698)	priA	4774800..4776998 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ECTO60_RS23740 (ECTO60_04699)	cytR	4777154..4778179 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ECTO60_RS23745 (ECTO60_04700)	ftsN	4778271..4779230 (+)	960	WP_000068834.1	cell division protein FtsN	-
ECTO60_RS23750 (ECTO60_04701)	hslV	4779323..4779853 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECTO60_RS23755 (ECTO60_04702)	hslU	4779863..4781194 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ECTO60_RS23760 (ECTO60_04703)	menA	4781261..4782187 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECTO60_RS23765 (ECTO60_04704)	rraA	4782280..4782765 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECTO60_RS23770 (ECTO60_04705)	zapB	4782850..4783095 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1026641 ECTO60_RS23740 WP_000644908.1 4777154..4778179(+) (cytR) [Escherichia coli isolate Escherichia coli str. TO60]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1026641 ECTO60_RS23740 WP_000644908.1 4777154..4778179(+) (cytR) [Escherichia coli isolate Escherichia coli str. TO60]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625