Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AB0764_RS21030 | Genome accession | NZ_CP162497 |
| Coordinates | 4008998..4010050 (-) | Length | 350 a.a. |
| NCBI ID | WP_013059177.1 | Uniprot ID | A0A8D4BHW7 |
| Organism | Priestia megaterium strain 10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4003998..4015050
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0764_RS20990 (AB0764_20985) | - | 4005014..4005838 (+) | 825 | WP_014458232.1 | YqhG family protein | - |
| AB0764_RS20995 (AB0764_20990) | - | 4005862..4006047 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| AB0764_RS21000 (AB0764_20995) | comGG | 4006091..4006465 (-) | 375 | WP_013059171.1 | competence type IV pilus minor pilin ComGG | - |
| AB0764_RS21005 (AB0764_21000) | comGF | 4006455..4006892 (-) | 438 | WP_014458231.1 | competence type IV pilus minor pilin ComGF | - |
| AB0764_RS21010 (AB0764_21005) | - | 4006889..4007227 (-) | 339 | WP_226554896.1 | type II secretion system protein | - |
| AB0764_RS21015 (AB0764_21010) | comGD | 4007211..4007693 (-) | 483 | WP_226554895.1 | competence type IV pilus minor pilin ComGD | - |
| AB0764_RS21020 (AB0764_21015) | comGC | 4007635..4007946 (-) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| AB0764_RS21025 (AB0764_21020) | comGB | 4007961..4009007 (-) | 1047 | WP_014458228.1 | competence type IV pilus assembly protein ComGB | - |
| AB0764_RS21030 (AB0764_21025) | comGA | 4008998..4010050 (-) | 1053 | WP_013059177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB0764_RS21035 (AB0764_21030) | - | 4010320..4010703 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| AB0764_RS21040 (AB0764_21035) | - | 4010965..4011201 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| AB0764_RS21045 (AB0764_21040) | - | 4011239..4011871 (-) | 633 | WP_208732872.1 | MBL fold metallo-hydrolase | - |
| AB0764_RS21050 (AB0764_21045) | - | 4012080..4012256 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| AB0764_RS21055 (AB0764_21050) | - | 4012292..4013194 (-) | 903 | WP_208732871.1 | M14 family metallocarboxypeptidase | - |
| AB0764_RS21060 (AB0764_21055) | - | 4013306..4014274 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| AB0764_RS21065 (AB0764_21060) | - | 4014277..4014483 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39625.02 Da Isoelectric Point: 9.0586
>NTDB_id=1026582 AB0764_RS21030 WP_013059177.1 4008998..4010050(-) (comGA) [Priestia megaterium strain 10]
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=1026582 AB0764_RS21030 WP_013059177.1 4008998..4010050(-) (comGA) [Priestia megaterium strain 10]
TTGACCGAAATTGAACAGTTTGCAACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTACGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCGAAGGAAATGTCTG
AACGGCTCATTTCACATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCACTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCGCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCGGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCATCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGATATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGTGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCAGCTTGTAAAAAGATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGTTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCAACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTACGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCGAAGGAAATGTCTG
AACGGCTCATTTCACATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCACTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCGCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCGGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCATCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGATATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGTGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCAGCTTGTAAAAAGATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGTTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |