Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AB0764_RS14540 Genome accession   NZ_CP162497
Coordinates   2841913..2842863 (-) Length   316 a.a.
NCBI ID   WP_209367012.1    Uniprot ID   -
Organism   Priestia megaterium strain 10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2836913..2847863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0764_RS14510 (AB0764_14505) - 2836988..2838067 (+) 1080 WP_115654341.1 PrsW family intramembrane metalloprotease -
  AB0764_RS14515 (AB0764_14510) - 2838536..2838676 (-) 141 WP_014459290.1 hypothetical protein -
  AB0764_RS14520 (AB0764_14515) - 2838932..2839204 (-) 273 Protein_2848 manganese catalase family protein -
  AB0764_RS14525 (AB0764_14520) - 2839241..2840197 (-) 957 WP_042992040.1 siderophore ABC transporter substrate-binding protein -
  AB0764_RS14530 (AB0764_14525) - 2840221..2840979 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  AB0764_RS14535 (AB0764_14530) - 2840973..2841920 (-) 948 WP_014459288.1 iron chelate uptake ABC transporter family permease subunit -
  AB0764_RS14540 (AB0764_14535) ceuB 2841913..2842863 (-) 951 WP_209367012.1 ABC transporter permease Machinery gene
  AB0764_RS14545 (AB0764_14540) - 2843431..2844237 (-) 807 WP_013057892.1 cell wall hydrolase -
  AB0764_RS14550 (AB0764_14545) - 2844600..2844854 (+) 255 WP_013057893.1 hypothetical protein -
  AB0764_RS14555 (AB0764_14550) - 2844936..2845100 (-) 165 WP_181903737.1 hypothetical protein -
  AB0764_RS14560 (AB0764_14555) - 2845591..2845776 (-) 186 WP_014459286.1 hypothetical protein -
  AB0764_RS14565 (AB0764_14560) - 2846333..2846896 (-) 564 WP_115654347.1 NAD(P)H-dependent oxidoreductase -
  AB0764_RS14570 (AB0764_14565) lepB 2847130..2847690 (-) 561 WP_060745332.1 signal peptidase I -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34993.27 Da        Isoelectric Point: 9.9188

>NTDB_id=1026572 AB0764_RS14540 WP_209367012.1 2841913..2842863(-) (ceuB) [Priestia megaterium strain 10]
MKFYQLILVFAVLAVLSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIVAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDLLGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1026572 AB0764_RS14540 WP_209367012.1 2841913..2842863(-) (ceuB) [Priestia megaterium strain 10]
TTGAAGTTTTATCAGTTAATTCTTGTATTTGCTGTACTAGCGGTTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACAATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCGTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGATTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAGTCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATCTTTTAGGCAGAGTTATTATTTTTCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.815

95.886

0.497


Multiple sequence alignment