Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3X07_RS06715 Genome accession   NZ_CP162488
Coordinates   1580519..1580920 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas medicagonis strain DAR 35659     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1575519..1585920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3X07_RS06705 (AB3X07_06700) - 1578447..1579328 (-) 882 WP_369943655.1 energy transducer TonB family protein -
  AB3X07_RS06710 (AB3X07_06705) gshB 1579325..1580275 (-) 951 WP_369943656.1 glutathione synthase -
  AB3X07_RS06715 (AB3X07_06710) pilG 1580519..1580920 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  AB3X07_RS06720 (AB3X07_06715) - 1580938..1581300 (+) 363 WP_369943657.1 response regulator -
  AB3X07_RS06725 (AB3X07_06720) - 1581302..1581832 (+) 531 WP_369943658.1 chemotaxis protein CheW -
  AB3X07_RS06730 (AB3X07_06725) - 1581873..1583909 (+) 2037 WP_369943659.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=1026433 AB3X07_RS06715 WP_003472648.1 1580519..1580920(+) (pilG) [Xanthomonas medicagonis strain DAR 35659]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1026433 AB3X07_RS06715 WP_003472648.1 1580519..1580920(+) (pilG) [Xanthomonas medicagonis strain DAR 35659]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTCATGGTGATCGATGACTCGAAGACGATCCGCCG
TACCGCCGAAACGCTGTTGAAGCGCGAGGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAACTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment