Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3X10_RS06335 Genome accession   NZ_CP162487
Coordinates   1505138..1505539 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas bundabergensis strain DAR 80977     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500138..1510539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3X10_RS06325 (AB3X10_06315) - 1503066..1503947 (-) 882 WP_369980016.1 energy transducer TonB family protein -
  AB3X10_RS06330 (AB3X10_06320) gshB 1503944..1504894 (-) 951 WP_369980017.1 glutathione synthase -
  AB3X10_RS06335 (AB3X10_06325) pilG 1505138..1505539 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  AB3X10_RS06340 (AB3X10_06330) - 1505557..1505919 (+) 363 WP_145702163.1 response regulator -
  AB3X10_RS06345 (AB3X10_06335) - 1505921..1506451 (+) 531 WP_145702161.1 chemotaxis protein CheW -
  AB3X10_RS06350 (AB3X10_06340) - 1506492..1508528 (+) 2037 WP_369980020.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=1026415 AB3X10_RS06335 WP_003472648.1 1505138..1505539(+) (pilG) [Xanthomonas bundabergensis strain DAR 80977]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1026415 AB3X10_RS06335 WP_003472648.1 1505138..1505539(+) (pilG) [Xanthomonas bundabergensis strain DAR 80977]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGGGTCATGGTGATCGATGACTCGAAGACGATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAGGGGTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGGTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAACTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment