Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STN4L_RS01915 Genome accession   NZ_LS974444
Coordinates   372927..373409 (+) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain N4L     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 367927..378409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STN4L_RS01895 (STN4L_00438) queG 368800..369918 (+) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -
  STN4L_RS01900 (STN4L_00440) prfB 369971..371069 (+) 1099 WP_096811488.1 peptide chain release factor 2 -
  STN4L_RS01905 (STN4L_00441) ftsE 371157..371849 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STN4L_RS01910 (STN4L_00442) ftsX 371842..372771 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STN4L_RS01915 (STN4L_00443) mutX 372927..373409 (+) 483 WP_011681193.1 NUDIX hydrolase Machinery gene
  STN4L_RS01920 (STN4L_00444) - 373420..374598 (+) 1179 WP_024704144.1 AI-2E family transporter -
  STN4L_RS01925 (STN4L_00445) - 374588..375817 (+) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  STN4L_RS01930 (STN4L_00446) lepB 375940..376497 (+) 558 WP_011681191.1 signal peptidase I -
  STN4L_RS01935 (STN4L_00448) pepT 376705..377928 (+) 1224 WP_046206468.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=1026401 STN4L_RS01915 WP_011681193.1 372927..373409(+) (mutX) [Streptococcus thermophilus strain N4L]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1026401 STN4L_RS01915 WP_011681193.1 372927..373409(+) (mutX) [Streptococcus thermophilus strain N4L]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706