Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   DQL00_RS11020 Genome accession   NZ_LS483523
Coordinates   2074843..2075109 (-) Length   88 a.a.
NCBI ID   WP_001819358.1    Uniprot ID   Q8DQT3
Organism   Streptococcus pneumoniae strain 4041STDY6836169     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2069843..2080109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL00_RS12485 - 2070952..2071221 (+) 270 WP_001808932.1 hypothetical protein -
  DQL00_RS11010 metF 2071403..2072269 (-) 867 WP_000089980.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  DQL00_RS11015 metE 2072333..2074582 (-) 2250 WP_000108186.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  DQL00_RS11020 HI0659 2074843..2075109 (-) 267 WP_001819358.1 helix-turn-helix domain-containing protein Machinery gene
  DQL00_RS11025 - 2075235..2075682 (-) 448 Protein_2050 IS30 family transposase -
  DQL00_RS11030 - 2075837..2076838 (+) 1002 WP_000597993.1 endonuclease/exonuclease/phosphatase family protein -
  DQL00_RS11035 pheT 2076906..2079311 (-) 2406 WP_023396182.1 phenylalanine--tRNA ligase subunit beta -
  DQL00_RS11040 - 2079388..2079897 (-) 510 WP_000619950.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9667.20 Da        Isoelectric Point: 4.6537

>NTDB_id=1026372 DQL00_RS11020 WP_001819358.1 2074843..2075109(-) (HI0659) [Streptococcus pneumoniae strain 4041STDY6836169]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=1026372 DQL00_RS11020 WP_001819358.1 2074843..2075109(-) (HI0659) [Streptococcus pneumoniae strain 4041STDY6836169]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DQT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.442

87.5

0.511