Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3423_RS08760 | Genome accession | NZ_CP162461 |
| Coordinates | 1747266..1747565 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20913 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1742266..1752565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3423_RS08720 (AB3423_08720) | - | 1742327..1742530 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AB3423_RS08725 (AB3423_08725) | - | 1742527..1743513 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3423_RS08730 (AB3423_08730) | - | 1743513..1743842 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3423_RS08735 (AB3423_08735) | - | 1743839..1744462 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| AB3423_RS08740 (AB3423_08740) | comGA | 1744514..1745488 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3423_RS08745 (AB3423_08745) | comGB | 1745460..1746530 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3423_RS08750 (AB3423_08750) | comGC | 1746544..1746855 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3423_RS08755 (AB3423_08755) | comGD | 1746833..1747279 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3423_RS08760 (AB3423_08760) | comGE | 1747266..1747565 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3423_RS08765 (AB3423_08765) | comGF | 1747483..1747980 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3423_RS08770 (AB3423_08770) | - | 1748077..1748223 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3423_RS08775 (AB3423_08775) | - | 1748213..1748737 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| AB3423_RS08780 (AB3423_08780) | gcvT | 1748896..1749987 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3423_RS08785 (AB3423_08785) | gcvPA | 1750007..1751353 (+) | 1347 | WP_117200971.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1026044 AB3423_RS08760 WP_000844413.1 1747266..1747565(+) (comGE) [Staphylococcus aureus strain TUM20913]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1026044 AB3423_RS08760 WP_000844413.1 1747266..1747565(+) (comGE) [Staphylococcus aureus strain TUM20913]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |