Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   AB3435_RS08090 Genome accession   NZ_CP162438
Coordinates   1618998..1620041 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain TUM22458     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1613998..1625041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3435_RS08060 (AB3435_08060) - 1614424..1614534 (+) 111 WP_001790257.1 hypothetical protein -
  AB3435_RS08065 (AB3435_08065) - 1614563..1614976 (+) 414 WP_001557448.1 hypothetical protein -
  AB3435_RS08070 (AB3435_08070) - 1615407..1616393 (-) 987 WP_000999717.1 aromatic acid exporter family protein -
  AB3435_RS08075 (AB3435_08075) map 1616924..1617682 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  AB3435_RS08080 (AB3435_08080) - 1617899..1618285 (+) 387 WP_001110179.1 hypothetical protein -
  AB3435_RS08085 (AB3435_08085) liaF 1618300..1619001 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  AB3435_RS08090 (AB3435_08090) vraS 1618998..1620041 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  AB3435_RS08095 (AB3435_08095) vraR 1620031..1620660 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  AB3435_RS08100 (AB3435_08100) - 1620773..1621990 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  AB3435_RS08105 (AB3435_08105) - 1622268..1622543 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  AB3435_RS08110 (AB3435_08110) - 1622550..1623014 (-) 465 WP_042109418.1 low molecular weight protein-tyrosine-phosphatase -
  AB3435_RS08115 (AB3435_08115) - 1623161..1623361 (+) 201 WP_000180460.1 DUF1128 family protein -
  AB3435_RS08120 (AB3435_08120) - 1623364..1624620 (+) 1257 WP_001795108.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1025547 AB3435_RS08090 WP_001017131.1 1618998..1620041(+) (vraS) [Staphylococcus aureus strain TUM22458]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1025547 AB3435_RS08090 WP_001017131.1 1618998..1620041(+) (vraS) [Staphylococcus aureus strain TUM22458]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment