Detailed information NTG0102496

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: AI22_RS03800
• Genome accession: NZ_CP007147
• Coordinates: 807232..808257 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa YL84
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 802232..813257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AI22_RS03775 (AI22_03785)	aroE	802434..803258 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
AI22_RS03780 (AI22_03790)	hemF	803316..804233 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
AI22_RS03785 (AI22_03795)	-	804424..805401 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
AI22_RS03790 (AI22_03800)	-	805411..805968 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
AI22_RS03795 (AI22_03805)	dprA	806009..807097 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
AI22_RS03800 (AI22_03810)	tsaP	807232..808257 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
AI22_RS03805 (AI22_03815)	def	808396..808902 (+)	507	WP_003107059.1	peptide deformylase	-
AI22_RS03810 (AI22_03820)	fmt	808957..809901 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
AI22_RS03815 (AI22_03825)	rsmB	809898..811202 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
AI22_RS03820 (AI22_03830)	trkA	811230..812603 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
AI22_RS03825 (AI22_03835)	-	812752..813069 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=102496 AI22_RS03800 WP_003097294.1 807232..808257(-) (tsaP) [Pseudomonas aeruginosa YL84]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=102496 AI22_RS03800 WP_003097294.1 807232..808257(-) (tsaP) [Pseudomonas aeruginosa YL84]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGGCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393