Detailed information NTG1024922

Bioinformatically predicted

Overview

• Name: radA/sms
• Type: Machinery gene
• Locus tag: DQN45_RS07885
• Genome accession: NZ_LS483438
• Coordinates: 1574305..1575681 (-)
• Length: 458 a.a.
• NCBI ID: WP_005668320.1
• Uniprot ID: A0ABY1VUX8
• Organism: Haemophilus influenzae strain NCTC12975
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1569305..1580681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN45_RS07870 (NCTC12975_01567)	lolA	1570341..1570958 (-)	618	WP_005690067.1	outer membrane lipoprotein chaperone LolA	-
DQN45_RS07875 (NCTC12975_01568)	-	1570976..1573744 (-)	2769	WP_042593981.1	DNA translocase FtsK	-
DQN45_RS07880 (NCTC12975_01569)	lrp	1573746..1574225 (-)	480	WP_042593982.1	leucine-responsive transcriptional regulator Lrp	-
DQN45_RS07885 (NCTC12975_01570)	radA/sms	1574305..1575681 (-)	1377	WP_005668320.1	DNA repair protein RadA	Machinery gene
DQN45_RS07890 (NCTC12975_01571)	-	1575783..1576865 (-)	1083	WP_042603003.1	inorganic triphosphatase	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49425.01 Da
• Isoelectric Point: 8.1109

>NTDB_id=1024922 DQN45_RS07885 WP_005668320.1 1574305..1575681(-) (radA/sms) [Haemophilus influenzae strain NCTC12975]
MAKAPKTAYVCNDCGAEFSRWQGQCSACKAWNTITEVRLISTAKSKNDRFSGYAGETQAKIQTLSEISLQETPRFSSGFN
ELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQVMCGLAKNMTALYVTGEESLQQVAMRASRLGLPNDQLKMLSETSVEQI
CNLADQLKPQIIVVDSIQVMHLADIQSSPGSVAQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDCSLL
LEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPSAIFLSRGDEITSGSSVMVLWEGTRPLLVEIQALVDHSM
LANPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVNVVGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGL
AGEIRPVPSGQERISEAAKHGFKRAIVPFGNKPKSAVENMQVFTVKKLTDALAVLDNL

Nucleotide

• Length: 1377 bp

>NTDB_id=1024922 DQN45_RS07885 WP_005668320.1 1574305..1575681(-) (radA/sms) [Haemophilus influenzae strain NCTC12975]
ATGGCTAAAGCCCCAAAAACAGCTTATGTATGTAACGATTGTGGTGCGGAGTTTTCTCGTTGGCAAGGGCAATGTTCCGC
TTGTAAAGCGTGGAATACAATCACGGAAGTGCGCTTAATTTCCACGGCAAAATCAAAAAATGATCGTTTTAGTGGCTATG
CGGGGGAAACTCAGGCAAAAATTCAAACGCTCTCTGAAATTAGTTTGCAAGAAACGCCTCGTTTTTCCAGTGGTTTTAAT
GAATTGGATCGTGTACTTGGTGGCGGGATCGTACCGGGTAGTGCGATTTTAATTGGAGGGCATCCTGGAGCAGGGAAAAG
TACATTGTTACTACAGGTTATGTGTGGTTTGGCAAAAAATATGACCGCACTTTATGTAACGGGAGAGGAATCATTACAAC
AGGTTGCGATGCGCGCAAGCCGATTGGGATTGCCAAATGATCAATTAAAAATGTTGTCAGAAACCTCTGTGGAACAGATT
TGTAATTTGGCGGATCAATTAAAACCGCAAATTATCGTGGTGGATTCTATCCAAGTAATGCATTTGGCAGATATTCAATC
ATCGCCAGGCAGTGTAGCTCAAGTGCGTGAATGCGCTTCTTTCCTCACTCGTTATGCGAAAACTCGCCAAGTGGCGATTA
TTATGGTTGGACACGTTACGAAAGACGGTACCCTTGCAGGGCCTAAAGTGTTAGAGCATGCCATTGACTGTTCATTGTTA
TTAGAAGGCGAAGCCGATTCTCGTTATCGTACTTTGCGTAGCCATAAAAACCGTTTTGGTGCAGTAAATGAATTGGGCGT
ATTTGGAATGACAGAGCAGGGTTTGCGCGAAGTGAAAAATCCATCGGCGATTTTTTTAAGTCGTGGTGATGAGATTACAT
CGGGCAGTTCTGTTATGGTACTTTGGGAGGGTACTCGTCCTCTTTTAGTGGAAATTCAAGCCTTGGTGGATCATTCAATG
CTGGCAAATCCTCGCCGTGTTGCGGTGGGATTAGAGCAAAATCGCTTAGCTCTATTACTGGCGGTGTTACACCGACATGG
TGGCTTACAAATGGCGGATCAAGATGTTTTTGTAAATGTGGTTGGTGGTGTAAAAGTCAGTGAAACCAGTGCGGATTTAG
CTTTGTTGCTTGCGTTAATTTCAAGTTTCCGTAATCGCCCTTTGCCGCAAGATTTAGTGATTTTTGGCGAAGTTGGATTA
GCGGGAGAAATTCGTCCTGTGCCAAGTGGACAGGAACGTATTAGCGAGGCTGCAAAACACGGTTTTAAACGTGCTATTGT
TCCTTTTGGTAACAAGCCGAAAAGTGCGGTCGAAAATATGCAGGTTTTTACTGTGAAAAAACTCACGGATGCGCTCGCTG
TGTTAGATAATTTGTAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_25) (80-223)

• Subunit ChlI of Mg-chelatase (ChlI) (346-431)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA/sms	Bacillus subtilis subsp. subtilis str. 168	46.623	100	0.467
radA	Streptococcus mitis NCTC 12261	43.267	98.908	0.428
radA	Streptococcus mitis SK321	43.267	98.908	0.428
radA	Streptococcus pneumoniae TIGR4	44.755	93.668	0.419
radA	Streptococcus pneumoniae D39	44.755	93.668	0.419
radA	Streptococcus pneumoniae Rx1	44.755	93.668	0.419
radA	Streptococcus pneumoniae R6	44.755	93.668	0.419