Detailed information NTG1024889

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: DQN45_RS02665
• Genome accession: NZ_LS483438
• Coordinates: 531789..532787 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC12975
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 526789..537787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN45_RS02640 (NCTC12975_00525)	tehA	527767..528711 (+)	945	WP_042593301.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
DQN45_RS02645 (NCTC12975_00526)	tsaA	528760..529479 (-)	720	WP_042593302.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
DQN45_RS02650 (NCTC12975_00527)	menA	529541..530452 (+)	912	WP_042593303.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
DQN45_RS02655 (NCTC12975_00528)	rraA	530504..530992 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
DQN45_RS02660 (NCTC12975_00529)	-	531132..531683 (-)	552	WP_005649445.1	TIGR00645 family protein	-
DQN45_RS02665 (NCTC12975_00530)	cytR	531789..532787 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
DQN45_RS02670 (NCTC12975_00531)	rbsK	532815..533735 (-)	921	WP_042593304.1	ribokinase	-
DQN45_RS02675 (NCTC12975_00532)	rbsB	533833..534711 (-)	879	WP_042593305.1	ribose ABC transporter substrate-binding protein RbsB	-
DQN45_RS02680 (NCTC12975_00533)	rbsC	534731..535699 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
DQN45_RS02685 (NCTC12975_00534)	rbsA	535715..537196 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
DQN45_RS02690	rbsD	537210..537628 (-)	419	Protein_507	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=1024889 DQN45_RS02665 WP_005659739.1 531789..532787(-) (cytR) [Haemophilus influenzae strain NCTC12975]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=1024889 DQN45_RS02665 WP_005659739.1 531789..532787(-) (cytR) [Haemophilus influenzae strain NCTC12975]
ATGGCGACAATGAAAGATATTGCTCGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361