Detailed information NTG1024709

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQN42_RS04945
• Genome accession: NZ_LS483436
• Coordinates: 1000354..1001424 (+)
• Length: 356 a.a.
• NCBI ID: WP_003077056.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain NCTC11324
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 995354..1006424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN42_RS04925 (NCTC11324_00994)	guaA	995677..997236 (-)	1560	WP_003076638.1	glutamine-hydrolyzing GMP synthase	-
DQN42_RS04930 (NCTC11324_00995)	-	997377..998075 (+)	699	WP_003076949.1	GntR family transcriptional regulator	-
DQN42_RS04935 (NCTC11324_00996)	-	998191..998523 (+)	333	WP_003077007.1	putative DNA-binding protein	-
DQN42_RS04940 (NCTC11324_00997)	ffh	998584..1000158 (+)	1575	WP_003076864.1	signal recognition particle protein	-
DQN42_RS04945 (NCTC11324_00998)	xerS	1000354..1001424 (+)	1071	WP_003077056.1	tyrosine recombinase XerS	Machinery gene
DQN42_RS04955 (NCTC11324_00999)	-	1001910..1003070 (-)	1161	WP_003076666.1	acetyl-CoA carboxylase biotin carboxylase subunit family protein	-
DQN42_RS04960 (NCTC11324_01000)	-	1003098..1003838 (-)	741	WP_003076787.1	esterase family protein	-
DQN42_RS04965 (NCTC11324_01001)	-	1003857..1004681 (-)	825	WP_016670404.1	alpha/beta hydrolase	-
DQN42_RS04970 (NCTC11324_01002)	trmFO	1004788..1006122 (-)	1335	WP_003076323.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41386.57 Da
• Isoelectric Point: 9.7921

>NTDB_id=1024709 DQN42_RS04945 WP_003077056.1 1000354..1001424(+) (xerS) [Streptococcus intermedius strain NCTC11324]
MKRELLLERIEKLKTILPWYVLEYYQSKLTVPYSFTTLYEYLKEYNRFFQWILDSGITDVSQIAEIPLSVLENMTKKDME
SFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLYKYLTEEVENENGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGTETEQFLNYIDEEYPKSLSNRALSSFNKNKERDLAMIALLLASGIRLSEAVNLDLKDLNLKIMVIEVTRKGGKRDS
VNIASFAKPYLERYLEIRSKRYKTEKSDTAFFLTGYRGVPNRIDASSVEKMVAKYSENFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=1024709 DQN42_RS04945 WP_003077056.1 1000354..1001424(+) (xerS) [Streptococcus intermedius strain NCTC11324]
ATGAAGCGTGAACTACTTTTAGAAAGAATTGAAAAACTAAAGACTATTCTCCCCTGGTATGTTTTGGAATATTATCAATC
TAAATTAACTGTTCCATACAGTTTTACAACCTTATATGAATATCTTAAAGAATACAATCGTTTTTTTCAGTGGATTTTAG
ACTCTGGAATTACTGATGTCTCACAAATTGCAGAAATTCCTTTATCGGTGTTGGAAAATATGACTAAAAAAGATATGGAA
TCATTTATCCTTTACTTACGGGAACGACCGCTGCTTAATGCTAATACCACGCAAAACGGAGTATCTCAAACAACTATTAA
CCGCACTCTTTCAGCTCTCTCTAGCCTTTATAAATATTTAACTGAAGAGGTGGAAAATGAGAATGGGGAGCCTTATTTTT
ACCGTAATGTTATGAAAAAAGTGTCCACTAAGAAAAAGAAAGAAACTTTAGCTGCACGAGCTGAAAATATTAAACAAAAA
CTCTTTTTAGGCACGGAAACTGAACAATTTTTGAATTATATTGATGAAGAATATCCTAAAAGTTTATCTAACCGTGCCCT
CTCCTCTTTCAACAAAAATAAAGAGAGAGATTTGGCGATGATAGCACTACTTCTTGCATCTGGTATTCGTCTATCCGAGG
CAGTAAATCTTGATTTGAAAGACCTCAATCTGAAAATAATGGTCATTGAAGTTACTCGTAAAGGTGGGAAAAGAGATTCT
GTTAATATTGCATCTTTCGCTAAACCTTATTTAGAAAGGTATTTGGAGATTCGATCCAAACGCTATAAAACTGAGAAATC
CGATACTGCCTTCTTTTTGACAGGATATAGAGGAGTCCCCAATCGGATTGACGCATCTAGTGTAGAAAAGATGGTTGCCA
AGTATTCTGAAAATTTTAAAGTTCGAGTGACTCCTCACAAACTCCGCCACACTCTAGCTACTAGGCTTTATGATGCGACC
AAGTCCCAGGTCTTGGTTAGCCATCAGCTAGGTCATGCTAGTACTCAGGTCACTGACCTCTATACCCATATCGTTAATGA
TGAGCAAAAGAATGCATTAGATAAATTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (189-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	87.36	100	0.874