Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | DQN79_RS00220 | Genome accession | NZ_LS483435 |
| Coordinates | 45611..46102 (-) | Length | 163 a.a. |
| NCBI ID | WP_003774216.1 | Uniprot ID | D4DTM1 |
| Organism | Neisseria elongata subsp. glycolytica strain NCTC11050 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 40611..51102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN79_RS00195 (NCTC11050_00039) | - | 40917..41894 (-) | 978 | WP_003774229.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| DQN79_RS00200 (NCTC11050_00040) | surE | 42019..42771 (-) | 753 | WP_003774227.1 | 5'/3'-nucleotidase SurE | - |
| DQN79_RS00205 (NCTC11050_00041) | hpnE | 42875..44176 (-) | 1302 | WP_003774223.1 | hydroxysqualene dehydroxylase HpnE | - |
| DQN79_RS00210 (NCTC11050_00042) | hpnD | 44173..45021 (-) | 849 | WP_041961501.1 | presqualene diphosphate synthase HpnD | - |
| DQN79_RS00215 (NCTC11050_00043) | - | 45121..45600 (-) | 480 | WP_111751051.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DQN79_RS00220 (NCTC11050_00044) | pilK | 45611..46102 (-) | 492 | WP_003774216.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| DQN79_RS00225 (NCTC11050_00045) | - | 46102..47193 (-) | 1092 | WP_041961503.1 | PilW family protein | - |
| DQN79_RS00230 (NCTC11050_00046) | pilV | 47199..47798 (-) | 600 | WP_052437422.1 | type IV pilus modification protein PilV | Regulator |
| DQN79_RS00235 (NCTC11050_00047) | - | 47800..48528 (-) | 729 | WP_041961504.1 | Tfp pilus assembly protein FimT/FimU | - |
| DQN79_RS00240 (NCTC11050_00048) | dnaB | 48645..50057 (-) | 1413 | WP_003774207.1 | replicative DNA helicase | - |
| DQN79_RS00245 (NCTC11050_00049) | - | 50149..50319 (-) | 171 | WP_040666303.1 | rubredoxin | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18079.76 Da Isoelectric Point: 5.7736
>NTDB_id=1024602 DQN79_RS00220 WP_003774216.1 45611..46102(-) (pilK) [Neisseria elongata subsp. glycolytica strain NCTC11050]
MKCQHNIKGFSLPIVMIMMLVLAIMVLAATQLFNTESRLSSNDADRKMTMQVAEAALRQGEQAIVDQNLIGLDKKAQFTS
GCNNGLCLPPQSGEAVWEGGSKSLLEKKGKEYVTDTEVHQKPRYVIEWISDDSERIVYRVTARAWGENANTVVTLQSYVA
ADI
MKCQHNIKGFSLPIVMIMMLVLAIMVLAATQLFNTESRLSSNDADRKMTMQVAEAALRQGEQAIVDQNLIGLDKKAQFTS
GCNNGLCLPPQSGEAVWEGGSKSLLEKKGKEYVTDTEVHQKPRYVIEWISDDSERIVYRVTARAWGENANTVVTLQSYVA
ADI
Nucleotide
Download Length: 492 bp
>NTDB_id=1024602 DQN79_RS00220 WP_003774216.1 45611..46102(-) (pilK) [Neisseria elongata subsp. glycolytica strain NCTC11050]
ATGAAATGCCAACATAATATAAAAGGGTTTTCTCTGCCGATTGTGATGATTATGATGTTGGTGCTTGCGATTATGGTTTT
GGCAGCAACGCAGTTATTCAATACTGAAAGCCGGCTGAGTAGTAATGATGCGGATCGCAAGATGACAATGCAGGTTGCGG
AGGCAGCTTTACGGCAGGGTGAGCAGGCTATTGTTGATCAAAATTTGATTGGTCTTGATAAAAAGGCACAATTTACTTCT
GGTTGTAATAATGGTTTATGTCTGCCACCACAGTCGGGAGAGGCTGTTTGGGAAGGAGGAAGCAAAAGCCTGCTTGAGAA
AAAGGGTAAAGAATATGTAACGGATACTGAGGTACATCAAAAGCCGAGGTATGTGATTGAATGGATTTCTGATGATAGTG
AGCGGATTGTTTATCGGGTGACGGCGAGAGCATGGGGGGAAAATGCTAATACAGTTGTTACCTTGCAATCGTATGTTGCA
GCAGATATTTAA
ATGAAATGCCAACATAATATAAAAGGGTTTTCTCTGCCGATTGTGATGATTATGATGTTGGTGCTTGCGATTATGGTTTT
GGCAGCAACGCAGTTATTCAATACTGAAAGCCGGCTGAGTAGTAATGATGCGGATCGCAAGATGACAATGCAGGTTGCGG
AGGCAGCTTTACGGCAGGGTGAGCAGGCTATTGTTGATCAAAATTTGATTGGTCTTGATAAAAAGGCACAATTTACTTCT
GGTTGTAATAATGGTTTATGTCTGCCACCACAGTCGGGAGAGGCTGTTTGGGAAGGAGGAAGCAAAAGCCTGCTTGAGAA
AAAGGGTAAAGAATATGTAACGGATACTGAGGTACATCAAAAGCCGAGGTATGTGATTGAATGGATTTCTGATGATAGTG
AGCGGATTGTTTATCGGGTGACGGCGAGAGCATGGGGGGAAAATGCTAATACAGTTGTTACCTTGCAATCGTATGTTGCA
GCAGATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
37.297 |
100 |
0.423 |