Detailed information NTG1024457

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQN28_RS04550
• Genome accession: NZ_LS483430
• Coordinates: 880055..881125 (-)
• Length: 356 a.a.
• NCBI ID: WP_044559782.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12044
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 875055..886125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN28_RS04530 (NCTC12044_00900)	citX	875634..876212 (+)	579	WP_111686280.1	citrate lyase holo-[acyl-carrier protein] synthase	-
DQN28_RS04535 (NCTC12044_00901)	-	876227..877621 (+)	1395	WP_021775222.1	oxaloacetate decarboxylase subunit alpha	-
DQN28_RS04540 (NCTC12044_00902)	citC	877731..878783 (-)	1053	WP_020905210.1	[citrate (pro-3S)-lyase] ligase	-
DQN28_RS04545 (NCTC12044_00903)	-	878872..879354 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
DQN28_RS04550 (NCTC12044_00904)	xerS	880055..881125 (-)	1071	WP_044559782.1	tyrosine recombinase XerS	Machinery gene
DQN28_RS04555 (NCTC12044_00905)	-	881595..882293 (+)	699	WP_014635476.1	XRE family transcriptional regulator	-
DQN28_RS04560 (NCTC12044_00906)	ffh	882428..883990 (-)	1563	WP_111686281.1	signal recognition particle protein	-
DQN28_RS04565 (NCTC12044_00907)	-	884005..884337 (-)	333	WP_002989745.1	putative DNA-binding protein	-
DQN28_RS04570 (NCTC12044_00908)	-	884435..885133 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41499.66 Da
• Isoelectric Point: 9.6220

>NTDB_id=1024457 DQN28_RS04550 WP_044559782.1 880055..881125(-) (xerS) [Streptococcus pyogenes strain NCTC12044]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTKVPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1024457 DQN28_RS04550 WP_044559782.1 880055..881125(-) (xerS) [Streptococcus pyogenes strain NCTC12044]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGAAGGTGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.337	100	0.803