Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   DQN52_RS06625 Genome accession   NZ_LS483426
Coordinates   1235335..1235949 (+) Length   204 a.a.
NCBI ID   WP_003786042.1    Uniprot ID   F5S632
Organism   Kingella kingae strain NCTC10529     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1230335..1240949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN52_RS06600 (NCTC10529_01289) - 1230530..1231189 (-) 660 WP_032827637.1 MotA/TolQ/ExbB proton channel family protein -
  DQN52_RS06605 (NCTC10529_01290) - 1231251..1232174 (-) 924 WP_003786038.1 energy transducer TonB -
  DQN52_RS06610 (NCTC10529_01291) - 1232487..1233017 (+) 531 WP_003786039.1 inorganic diphosphatase -
  DQN52_RS06615 (NCTC10529_01292) dnaB 1233147..1234556 (+) 1410 WP_003786040.1 replicative DNA helicase -
  DQN52_RS11500 (NCTC10529_01293) - 1234590..1235093 (+) 504 WP_003786041.1 Tfp pilus assembly protein FimT/FimU -
  DQN52_RS06625 (NCTC10529_01294) pilV/pilI 1235335..1235949 (+) 615 WP_003786042.1 type IV pilus modification protein PilV Regulator
  DQN52_RS06630 (NCTC10529_01295) - 1235970..1237034 (+) 1065 WP_003786043.1 PilW family protein -
  DQN52_RS06635 (NCTC10529_01296) - 1237068..1237676 (+) 609 WP_003786044.1 PilX N-terminal domain-containing pilus assembly protein -
  DQN52_RS06640 (NCTC10529_01297) - 1237683..1238168 (+) 486 WP_003786045.1 type IV pilin protein -
  DQN52_RS06645 (NCTC10529_01298) - 1238292..1239956 (+) 1665 WP_003786047.1 AMP-binding protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22268.41 Da        Isoelectric Point: 7.8261

>NTDB_id=1024390 DQN52_RS06625 WP_003786042.1 1235335..1235949(+) (pilV/pilI) [Kingella kingae strain NCTC10529]
MKNMTYFHTKYSMKGATLLEVMISVLLLTFGILALMAAQLRSVASISEAENRSIVSQAAEALAEGMQMNAVLTKNGTTYR
RRYSNYVPKSKPLYPGSAVTAPTSLNRTNITKAELAAKHLDEFEYVLSTQLPNVSVLAYAICLDKPDATPPVLGDGGALT
DNCAPNNNERDTNMIKIAWRMGNANGTDNNQQSTTYTYMLEVGN

Nucleotide


Download         Length: 615 bp        

>NTDB_id=1024390 DQN52_RS06625 WP_003786042.1 1235335..1235949(+) (pilV/pilI) [Kingella kingae strain NCTC10529]
ATGAAAAATATGACTTATTTTCATACTAAATATTCAATGAAAGGTGCAACACTACTGGAAGTGATGATTTCCGTGTTGTT
GCTGACCTTTGGTATTTTGGCATTGATGGCGGCGCAGTTGCGTTCTGTTGCAAGCATTAGTGAAGCGGAAAATCGCAGTA
TTGTGTCGCAGGCTGCAGAAGCGTTAGCAGAAGGCATGCAAATGAATGCAGTTCTGACTAAAAATGGAACGACTTATCGT
CGTCGTTATTCTAATTATGTGCCAAAGAGTAAGCCATTGTATCCAGGCAGCGCAGTCACAGCTCCTACTTCTTTGAACAG
AACAAATATTACAAAAGCAGAGCTGGCAGCAAAACATTTAGATGAATTTGAATATGTTTTGAGTACTCAATTACCGAATG
TATCTGTGCTTGCATATGCGATTTGTTTAGATAAACCAGATGCAACTCCTCCTGTTTTGGGTGATGGCGGGGCATTGACC
GATAATTGTGCACCAAACAATAATGAGCGTGACACCAATATGATTAAGATTGCATGGCGCATGGGTAATGCCAATGGAAC
GGACAATAATCAACAATCTACTACTTATACCTATATGTTAGAAGTAGGCAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5S632

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

36.111

100

0.382