Detailed information NTG1024224

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQN31_RS04560
• Genome accession: NZ_LS483421
• Coordinates: 883960..885030 (+)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC10877
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 878960..890030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN31_RS04540 (NCTC10877_00899)	-	879971..880669 (+)	699	WP_002989743.1	GntR family transcriptional regulator	-
DQN31_RS04545 (NCTC10877_00900)	-	880767..881099 (+)	333	WP_002989745.1	putative DNA-binding protein	-
DQN31_RS04550 (NCTC10877_00901)	ffh	881114..882676 (+)	1563	WP_014407597.1	signal recognition particle protein	-
DQN31_RS04555 (NCTC10877_00902)	-	882793..883491 (-)	699	WP_014407596.1	XRE family transcriptional regulator	-
DQN31_RS04560 (NCTC10877_00903)	xerS	883960..885030 (+)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQN31_RS04565 (NCTC10877_00904)	-	885730..886212 (+)	483	WP_002984600.1	PASTA domain-containing protein	-
DQN31_RS04570 (NCTC10877_00905)	citC	886301..887353 (+)	1053	WP_014407595.1	[citrate (pro-3S)-lyase] ligase	-
DQN31_RS04575 (NCTC10877_00906)	-	887464..888858 (-)	1395	WP_014407594.1	oxaloacetate decarboxylase subunit alpha	-
DQN31_RS04580 (NCTC10877_00907)	citX	888873..889451 (-)	579	WP_014407593.1	citrate lyase holo-[acyl-carrier protein] synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1024224 DQN31_RS04560 WP_002984598.1 883960..885030(+) (xerS) [Streptococcus pyogenes strain NCTC10877]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1024224 DQN31_RS04560 WP_002984598.1 883960..885030(+) (xerS) [Streptococcus pyogenes strain NCTC10877]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCACCAATTGGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806