Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   DQN75_RS09170 Genome accession   NZ_LS483420
Coordinates   1379644..1379862 (-) Length   72 a.a.
NCBI ID   WP_072135532.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13739     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1374644..1384862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS09280 - 1375145..1375447 (-) 303 Protein_1284 lysostaphin resistance A-like protein -
  DQN75_RS06955 - 1375421..1375668 (-) 248 Protein_1285 hypothetical protein -
  DQN75_RS06960 (NCTC13739_01381) - 1375915..1376325 (-) 411 WP_012766654.1 hypothetical protein -
  DQN75_RS06970 (NCTC13739_01383) - 1376851..1377069 (-) 219 WP_030126105.1 bacteriocin -
  DQN75_RS06975 (NCTC13739_01384) - 1377146..1377370 (-) 225 WP_030126106.1 Blp family class II bacteriocin -
  DQN75_RS06980 (NCTC13739_01385) - 1377651..1379447 (+) 1797 Protein_1289 peptide cleavage/export ABC transporter -
  DQN75_RS09170 comE/blpR 1379644..1379862 (-) 219 WP_072135532.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  DQN75_RS09175 (NCTC13739_01386) - 1380152..1380406 (+) 255 WP_080471158.1 hypothetical protein -
  DQN75_RS06995 (NCTC13739_01387) - 1380712..1381188 (-) 477 WP_111685095.1 NUDIX hydrolase -
  DQN75_RS07000 (NCTC13739_01388) era 1381208..1382104 (-) 897 WP_003047080.1 GTPase Era -
  DQN75_RS07005 (NCTC13739_01389) - 1382224..1382631 (-) 408 WP_002985746.1 diacylglycerol kinase family protein -
  DQN75_RS07010 (NCTC13739_01390) ybeY 1382612..1383109 (-) 498 WP_002985748.1 rRNA maturation RNase YbeY -
  DQN75_RS07015 (NCTC13739_01391) - 1383268..1383843 (-) 576 WP_009880369.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8666.13 Da        Isoelectric Point: 10.5045

>NTDB_id=1024167 DQN75_RS09170 WP_072135532.1 1379644..1379862(-) (comE/blpR) [Streptococcus pyogenes strain NCTC13739]
MVLYSTRERIEFYGELSEIVKQEPRLFQCHRSFVVNPYNISSIQRLERKVYLKKRFILSSIKAKSYCSKRSS

Nucleotide


Download         Length: 219 bp        

>NTDB_id=1024167 DQN75_RS09170 WP_072135532.1 1379644..1379862(-) (comE/blpR) [Streptococcus pyogenes strain NCTC13739]
TTGGTTCTTTATTCTACTAGAGAAAGGATTGAATTTTATGGGGAGTTATCTGAAATCGTTAAGCAAGAACCAAGATTATT
TCAATGCCATCGATCATTTGTTGTTAATCCCTACAATATATCTTCAATACAACGATTAGAACGTAAGGTTTATTTAAAAA
AACGGTTCATCTTGTCTAGTATCAAGGCTAAAAGTTACTGCTCTAAAAGAAGCAGTTGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

56.604

73.611

0.417

Multiple sequence alignment