Detailed information NTG1024079

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: DQN75_RS00335
• Genome accession: NZ_LS483420
• Coordinates: 54018..55016 (+)
• Length: 332 a.a.
• NCBI ID: WP_111684466.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC13739
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 49018..60016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN75_RS00320 (NCTC13739_00064)	-	50020..51438 (+)	1419	WP_011888524.1	hypothetical protein	-
DQN75_RS00325 (NCTC13739_00065)	purB	51458..52750 (+)	1293	WP_038433842.1	adenylosuccinate lyase	-
DQN75_RS00330 (NCTC13739_00066)	comR	52881..53792 (+)	912	WP_002986681.1	transcriptional regulator Rgg4/ComR	Regulator
DQN75_RS09305 (NCTC13739_00067)	comS	53876..53971 (+)	96	WP_198462994.1	quorum-sensing system DWW-type pheromone	Regulator
DQN75_RS00335 (NCTC13739_00068)	ruvB	54018..55016 (+)	999	WP_111684466.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
DQN75_RS00340 (NCTC13739_00069)	-	55154..55591 (+)	438	WP_002994668.1	low molecular weight protein-tyrosine-phosphatase	-
DQN75_RS00345 (NCTC13739_00070)	-	55614..56015 (+)	402	WP_111684468.1	MORN repeat-containing protein	-
DQN75_RS00350 (NCTC13739_00071)	-	56012..57787 (+)	1776	WP_111684470.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37565.11 Da
• Isoelectric Point: 5.3005

>NTDB_id=1024079 DQN75_RS00335 WP_111684466.1 54018..55016(+) (ruvB) [Streptococcus pyogenes strain NCTC13739]
MARILDNDVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGNGIIT
AQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEPYLIQKGFLMRTRTGRVATQK
AYRHLGYPYQNT

Nucleotide

• Length: 999 bp

>NTDB_id=1024079 DQN75_RS00335 WP_111684466.1 54018..55016(+) (ruvB) [Streptococcus pyogenes strain NCTC13739]
ATGGCTAGAATTTTAGACAATGATGTAATGGGAAATGAGGAGTTTTCGGATCGGACTCTTCGCCCTCAATATCTACACGA
ATATATTGGACAAGATAAAGTTAAGGAACAATTCGCTATTTTTATAGAAGCAGCTAAAAGACGTGACGAATCTTTAGACC
ATGTTTTATTATTTGGACCTCCAGGACTGGGAAAAACAACAATGGCATTTGTGATTGCCAATGAATTGGGAGTTAATTTA
AAGCAAACTTCAGGTCCTGCTGTTGAGAAAGCTGGAGATTTGGTAGCTATTTTAAATGAATTAGAACCAGGGGATATTTT
GTTTATTGATGAAATTCACCGCATGCCAATGTCTGTCGAGGAAGTGCTATATAGTGCTATGGAAGACTTCTATATTGATA
TTATGATTGGCGCTGGAGATACTAGTCGTAGTATTCATTTGGATCTGCCTCCATTTACATTGATTGGTGCTACTACACGT
GCAGGCATGTTATCTAATCCCCTCAGAGCTCGTTTTGGTATCACTGGTCACATGGAATACTATCAAGAAAAGGATTTGAC
AGAGATTGTGGAGCGTACAGCTACTATTTTTGAAATAAAAATAGACCATGAAGCTGCACGGAAATTAGCTTGTCGCAGTA
GAGGAACGCCCCGCATTGCTAATCGATTACTAAAACGAGTGCGTGACTATGCTCAAATTATTGGTAATGGCATCATAACG
GCTCAAATAACTGATAGAGCTTTGACTATGTTAGATGTTGACCGCGAAGGTCTCGATTACATTGATCAGAAAATTTTACG
AACGATGATTGAGATGTATCAGGGAGGACCAGTTGGTTTGGGGACATTATCTGTGAATATTGCCGAGGAGCGTAATACAG
TTGAAGAGATGTATGAACCCTACTTAATTCAAAAAGGCTTTCTCATGCGAACACGAACAGGTCGTGTAGCGACGCAAAAG
GCTTATCGTCATCTTGGCTATCCCTATCAAAACACTTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	85.152	99.398	0.846
ruvB	Streptococcus pneumoniae D39	85.152	99.398	0.846
ruvB	Streptococcus pneumoniae TIGR4	84.848	99.398	0.843
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.514	97.289	0.569
ruvB	Helicobacter pylori 26695	48.936	99.096	0.485
ruvB	Synechocystis sp. PCC 6803	50.16	94.277	0.473