Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DB825_RS15915 Genome accession   NZ_CP162103
Coordinates   3617249..3617650 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas perforans strain GEV2048     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3612249..3622650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DB825_RS15900 (DB825_015885) - 3614263..3616299 (-) 2037 WP_008575181.1 methyl-accepting chemotaxis protein -
  DB825_RS15905 (DB825_015890) - 3616339..3616869 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  DB825_RS15910 (DB825_015895) - 3616869..3617231 (-) 363 WP_005913708.1 PleD family two-component system response regulator -
  DB825_RS15915 (DB825_015900) pilG 3617249..3617650 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  DB825_RS15920 (DB825_015905) gshB 3617887..3618837 (+) 951 WP_008575184.1 glutathione synthase -
  DB825_RS15925 (DB825_015910) - 3618834..3619709 (+) 876 WP_008575185.1 energy transducer TonB -
  DB825_RS15930 (DB825_015915) - 3620052..3620333 (-) 282 Protein_3110 ADP-ribosylglycohydrolase family protein -
  DB825_RS15935 (DB825_015920) - 3620361..3620747 (+) 387 WP_033478942.1 hypothetical protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=1024079 DB825_RS15915 WP_005913706.1 3617249..3617650(-) (pilG) [Xanthomonas perforans strain GEV2048]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1024079 DB825_RS15915 WP_005913706.1 3617249..3617650(-) (pilG) [Xanthomonas perforans strain GEV2048]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment