Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DQN54_RS05830 Genome accession   NZ_LS483417
Coordinates   1098371..1098835 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain NCTC11902     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1093371..1103835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN54_RS05810 (NCTC11902_01103) - 1094322..1095290 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  DQN54_RS05815 (NCTC11902_01104) pdrM 1095444..1096805 (-) 1362 WP_000278540.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  DQN54_RS05820 (NCTC11902_01105) - 1096816..1097076 (-) 261 WP_001105925.1 hypothetical protein -
  DQN54_RS05825 (NCTC11902_01106) - 1097090..1098358 (-) 1269 WP_000924501.1 dihydroorotase -
  DQN54_RS05830 (NCTC11902_01107) mutX 1098371..1098835 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  DQN54_RS05835 (NCTC11902_01108) - 1098845..1099498 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  DQN54_RS05840 (NCTC11902_01109) - 1099634..1100236 (-) 603 WP_001810555.1 hypothetical protein -
  DQN54_RS05845 (NCTC11902_01110) - 1100294..1101007 (-) 714 WP_000499431.1 YjjG family noncanonical pyrimidine nucleotidase -
  DQN54_RS05850 (NCTC11902_01111) dhaM 1101465..1101845 (-) 381 WP_000443784.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  DQN54_RS12105 - 1101845..1101919 (-) 75 Protein_1109 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=1023912 DQN54_RS05830 WP_001135768.1 1098371..1098835(-) (mutX) [Streptococcus pneumoniae strain NCTC11902]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1023912 DQN54_RS05830 WP_001135768.1 1098371..1098835(-) (mutX) [Streptococcus pneumoniae strain NCTC11902]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAATGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987