Detailed information NTG0102391

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECRM12761_RS24085
• Genome accession: NZ_CP007133
• Coordinates: 4741954..4742979 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O145:H28 str. RM12761
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4736954..4747979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECRM12761_RS24060 (ECRM12761_23330)	rraA	4737368..4737853 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECRM12761_RS24065 (ECRM12761_23335)	menA	4737946..4738872 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECRM12761_RS24070 (ECRM12761_23340)	hslU	4738939..4740270 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ECRM12761_RS24075 (ECRM12761_23345)	hslV	4740280..4740810 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECRM12761_RS24080 (ECRM12761_23350)	ftsN	4740903..4741862 (-)	960	WP_071826547.1	cell division protein FtsN	-
ECRM12761_RS24085 (ECRM12761_23355)	cytR	4741954..4742979 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECRM12761_RS24090 (ECRM12761_23365)	priA	4743135..4745333 (-)	2199	WP_025380646.1	primosomal protein N'	Machinery gene
ECRM12761_RS24095 (ECRM12761_23370)	rpmE	4745536..4745748 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ECRM12761_RS24100 (ECRM12761_23375)	yiiX	4745809..4746417 (-)	609	WP_000702305.1	YiiX family permuted papain-like enzyme	-
ECRM12761_RS24105 (ECRM12761_23380)	metJ	4746477..4746794 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=102391 ECRM12761_RS24085 WP_000644904.1 4741954..4742979(-) (cytR) [Escherichia coli O145:H28 str. RM12761]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=102391 ECRM12761_RS24085 WP_000644904.1 4741954..4742979(-) (cytR) [Escherichia coli O145:H28 str. RM12761]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCTCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628