Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   DQN57_RS00265 Genome accession   NZ_LS483415
Coordinates   34885..35640 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain NCTC8304     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 29885..40640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN57_RS09575 - 30901..31107 (-) 207 Protein_15 hypothetical protein -
  DQN57_RS00255 (NCTC8304_00050) pcsB 32288..33484 (+) 1197 WP_011017226.1 peptidoglycan hydrolase PcsB -
  DQN57_RS00260 (NCTC8304_00051) - 33737..34699 (+) 963 WP_002986722.1 ribose-phosphate diphosphokinase -
  DQN57_RS00265 (NCTC8304_00052) recO 34885..35640 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  DQN57_RS00270 (NCTC8304_00053) plsX 35743..36750 (+) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  DQN57_RS00275 (NCTC8304_00054) - 36743..36985 (+) 243 WP_002986713.1 phosphopantetheine-binding protein -
  DQN57_RS00280 (NCTC8304_00055) purC 37136..37840 (+) 705 WP_017649245.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=1023767 DQN57_RS00265 WP_002986719.1 34885..35640(+) (recO) [Streptococcus pyogenes strain NCTC8304]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=1023767 DQN57_RS00265 WP_002986719.1 34885..35640(+) (recO) [Streptococcus pyogenes strain NCTC8304]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGTACTGATTTA
CCACTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602