Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB1N67_RS02140 Genome accession   NZ_CP162012
Coordinates   464261..464662 (+) Length   133 a.a.
NCBI ID   WP_043207200.1    Uniprot ID   A0AAX0W0H8
Organism   Pseudomonas guariconensis strain NY14324     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 459261..469662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1N67_RS02110 (AB1N67_02110) - 459327..460331 (-) 1005 WP_043207186.1 aspartate carbamoyltransferase catalytic subunit -
  AB1N67_RS02115 (AB1N67_02115) pyrR 460344..460862 (-) 519 WP_043207188.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB1N67_RS02120 (AB1N67_02120) ruvX 460914..461339 (-) 426 WP_182817036.1 Holliday junction resolvase RuvX -
  AB1N67_RS02125 (AB1N67_02125) - 461339..461908 (-) 570 WP_043207193.1 YqgE/AlgH family protein -
  AB1N67_RS02130 (AB1N67_02130) - 462028..462927 (-) 900 WP_043207195.1 energy transducer TonB -
  AB1N67_RS02135 (AB1N67_02135) gshB 463068..464021 (-) 954 WP_043207196.1 glutathione synthase -
  AB1N67_RS02140 (AB1N67_02140) pilG 464261..464662 (+) 402 WP_043207200.1 PleD family two-component system response regulator Regulator
  AB1N67_RS02145 (AB1N67_02145) pilH 464712..465077 (+) 366 WP_043207202.1 twitching motility response regulator PilH -
  AB1N67_RS02150 (AB1N67_02150) - 465074..465628 (+) 555 WP_043207204.1 chemotaxis protein CheW -
  AB1N67_RS02155 (AB1N67_02155) - 465700..467703 (+) 2004 WP_232092099.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14739.04 Da        Isoelectric Point: 6.2259

>NTDB_id=1023515 AB1N67_RS02140 WP_043207200.1 464261..464662(+) (pilG) [Pseudomonas guariconensis strain NY14324]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPQVIFVDVLMPRLDGYQTCAVIKQNSTFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFVVQEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1023515 AB1N67_RS02140 WP_043207200.1 464261..464662(+) (pilG) [Pseudomonas guariconensis strain NY14324]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGCGAGGC
CGGCTGCGAGGTGATCACCGCCAGTGATGGTTTCGATGCCCTGGCCAAGATCGTCGACCACAAGCCCCAGGTCATCTTCG
TCGATGTACTGATGCCTCGCCTGGATGGCTACCAGACCTGCGCGGTGATCAAGCAGAACAGCACCTTCAAGGATACCCCG
GTCATCCTGCTGTCCTCGCGCGACGGCCTGTTCGACAAGGCCCGCGGTCGGGTGGTCGGCTCAGACCAGTTCCTGACCAA
GCCATTCAGCAAGGAAGAACTGCTCGATGCGATCAGGGCTCATGTGCCCGGTTTCGTCGTGCAAGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.167

90.226

0.624

Multiple sequence alignment