Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3G31_RS18305 Genome accession   NZ_CP162006
Coordinates   3939654..3940052 (-) Length   132 a.a.
NCBI ID   WP_367847495.1    Uniprot ID   -
Organism   Rhodoferax sp. WC2427     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3934654..3945052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3G31_RS18290 (AB3G31_18290) - 3936486..3938636 (-) 2151 WP_367850381.1 methyl-accepting chemotaxis protein -
  AB3G31_RS18295 (AB3G31_18295) - 3938745..3939275 (-) 531 WP_367847493.1 chemotaxis protein CheW -
  AB3G31_RS18300 (AB3G31_18300) - 3939289..3939654 (-) 366 WP_367847494.1 PleD family two-component system response regulator -
  AB3G31_RS18305 (AB3G31_18305) pilG 3939654..3940052 (-) 399 WP_367847495.1 PleD family two-component system response regulator Regulator
  AB3G31_RS18310 (AB3G31_18310) - 3940102..3940275 (-) 174 WP_315182571.1 rubredoxin -
  AB3G31_RS18315 (AB3G31_18315) - 3940371..3941372 (+) 1002 WP_367847496.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  AB3G31_RS18320 (AB3G31_18320) hemL 3941356..3942669 (+) 1314 WP_367847497.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AB3G31_RS18325 (AB3G31_18325) - 3942792..3943454 (+) 663 WP_367847498.1 glycine zipper 2TM domain-containing protein -
  AB3G31_RS18330 (AB3G31_18330) - 3943650..3944240 (+) 591 WP_367847499.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14594.93 Da        Isoelectric Point: 7.8554

>NTDB_id=1023455 AB3G31_RS18305 WP_367847495.1 3939654..3940052(-) (pilG) [Rhodoferax sp. WC2427]
MSTIATTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKINDHQPQLIFCDILMPKLDGYQTCAIIKRNPKFA
SIPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGAAMQGTI

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1023455 AB3G31_RS18305 WP_367847495.1 3939654..3940052(-) (pilG) [Rhodoferax sp. WC2427]
GTGAGTACGATTGCCACGACTTTCAAAGTCCTTGTGGTGGATGACAGCAACACGATCCGTCGCAGTGCTGAAATCTTCCT
GAAGCAGGGCGGGCACGAGGTGCTGTTGGCCGAGGACGGCTTCGATGCCCTGTCCAAAATCAACGACCACCAGCCGCAGC
TGATTTTTTGCGACATCCTGATGCCCAAGCTGGACGGTTACCAGACCTGCGCCATCATCAAACGCAATCCCAAATTTGCC
TCCATCCCGGTGGTGATGCTGTCGTCCAAGGATGGCGTTTTTGACAAGGCCCGTGGCCGCATGGTCGGCTCACAAGACTA
CTTGACCAAACCGTTTACCAAAGACCAGTTGCTCCAGGCGGTGCAGCAGTTTGGTGCCGCCATGCAAGGAACCATTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.829

88.636

0.53

Multiple sequence alignment