Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB3G53_RS08535 | Genome accession | NZ_CP161999 |
| Coordinates | 1782779..1783159 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836912.1 | Uniprot ID | A0AAP1R0C8 |
| Organism | Acinetobacter baumannii strain SIMBA061 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1777779..1788159
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G53_RS08505 (AB3G53_08505) | kdsB | 1778682..1779443 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AB3G53_RS08510 (AB3G53_08510) | - | 1779455..1780435 (+) | 981 | WP_057092777.1 | DNA polymerase III subunit delta' | - |
| AB3G53_RS08515 (AB3G53_08515) | - | 1780447..1780788 (+) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| AB3G53_RS08520 (AB3G53_08520) | - | 1780806..1781579 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AB3G53_RS08525 (AB3G53_08525) | - | 1781617..1782225 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB3G53_RS08530 (AB3G53_08530) | - | 1782235..1782789 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| AB3G53_RS08535 (AB3G53_08535) | xcpV | 1782779..1783159 (+) | 381 | WP_000836912.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB3G53_RS08540 (AB3G53_08540) | xcpW | 1783159..1783860 (+) | 702 | WP_000594582.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB3G53_RS08545 (AB3G53_08545) | gspK | 1783860..1784819 (+) | 960 | WP_057092779.1 | type II secretion system minor pseudopilin GspK | - |
| AB3G53_RS08550 (AB3G53_08550) | - | 1785049..1785645 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| AB3G53_RS08555 (AB3G53_08555) | ung | 1785696..1786409 (+) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| AB3G53_RS08560 (AB3G53_08560) | - | 1786406..1787530 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB3G53_RS08565 (AB3G53_08565) | tadA | 1787537..1788040 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13965.16 Da Isoelectric Point: 9.8004
>NTDB_id=1023385 AB3G53_RS08535 WP_000836912.1 1782779..1783159(+) (xcpV) [Acinetobacter baumannii strain SIMBA061]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1023385 AB3G53_RS08535 WP_000836912.1 1782779..1783159(+) (xcpV) [Acinetobacter baumannii strain SIMBA061]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |