Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AB2M34_RS21500 | Genome accession | NZ_CP161903 |
| Coordinates | 4030566..4030856 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain DYJ24 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 4025566..4035856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M34_RS21485 (AB2M34_21485) | yabE | 4025761..4027074 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| AB2M34_RS21490 (AB2M34_21490) | dayD | 4027230..4027997 (-) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| AB2M34_RS21495 (AB2M34_21495) | metG | 4028077..4030071 (-) | 1995 | WP_129134154.1 | methionine--tRNA ligase | - |
| AB2M34_RS21500 (AB2M34_21500) | abrB | 4030566..4030856 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AB2M34_RS21505 (AB2M34_21505) | rsmI | 4030905..4031783 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AB2M34_RS21510 (AB2M34_21510) | yazA | 4031758..4032057 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| AB2M34_RS21515 (AB2M34_21515) | trmNF | 4032044..4032787 (-) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AB2M34_RS21520 (AB2M34_21520) | yabA | 4032846..4033205 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AB2M34_RS21525 (AB2M34_21525) | ricT | 4033220..4034047 (-) | 828 | WP_041338386.1 | competence/sporulation regulator complex protein RicT | - |
| AB2M34_RS21530 (AB2M34_21530) | holB | 4034050..4035039 (-) | 990 | WP_129134153.1 | DNA polymerase III subunit delta' | - |
| AB2M34_RS21535 (AB2M34_21535) | yaaR | 4035051..4035491 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| AB2M34_RS21540 (AB2M34_21540) | darA | 4035504..4035833 (-) | 330 | WP_088272133.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1023109 AB2M34_RS21500 WP_003226760.1 4030566..4030856(+) (abrB) [Bacillus subtilis strain DYJ24]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1023109 AB2M34_RS21500 WP_003226760.1 4030566..4030856(+) (abrB) [Bacillus subtilis strain DYJ24]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |