Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB2M34_RS15590 Genome accession   NZ_CP161903
Coordinates   2876984..2877175 (-) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain DYJ24     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2871984..2882175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS15565 (AB2M34_15565) appD 2872309..2873295 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  AB2M34_RS15570 (AB2M34_15570) yjaZ 2873487..2874272 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  AB2M34_RS15575 (AB2M34_15575) fabF 2874348..2875589 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  AB2M34_RS15580 (AB2M34_15580) fabH 2875612..2876550 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  AB2M34_RS15585 (AB2M34_15585) yjzB 2876715..2876954 (+) 240 WP_003232972.1 spore coat protein YjzB -
  AB2M34_RS15590 (AB2M34_15590) comZ 2876984..2877175 (-) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  AB2M34_RS15595 (AB2M34_15595) med 2877190..2878143 (-) 954 WP_069837427.1 transcriptional regulator Med Regulator
  AB2M34_RS15600 (AB2M34_15600) - 2878234..2878791 (-) 558 WP_014479435.1 hypothetical protein -
  AB2M34_RS15605 (AB2M34_15605) - 2878873..2879607 (-) 735 WP_014479433.1 hypothetical protein -
  AB2M34_RS15610 (AB2M34_15610) yjzD 2879856..2880041 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  AB2M34_RS15615 (AB2M34_15615) yjzC 2880088..2880267 (-) 180 WP_003245356.1 YjzC family protein -
  AB2M34_RS15620 (AB2M34_15620) - 2880445..2881595 (+) 1151 WP_087614160.1 IS3 family transposase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=1023090 AB2M34_RS15590 WP_046380930.1 2876984..2877175(-) (comZ) [Bacillus subtilis strain DYJ24]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1023090 AB2M34_RS15590 WP_046380930.1 2876984..2877175(-) (comZ) [Bacillus subtilis strain DYJ24]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968

Multiple sequence alignment