Detailed information NTG1023080

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AB2M34_RS13750
• Genome accession: NZ_CP161903
• Coordinates: 2552165..2552443 (-)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis strain DYJ24
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2547165..2557443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M34_RS13730 (AB2M34_13730)	ade	2547229..2548962 (-)	1734	WP_069837481.1	adenine deaminase	-
AB2M34_RS13735 (AB2M34_13735)	ktrC	2549117..2549782 (-)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
AB2M34_RS13740 (AB2M34_13740)	ykqA	2549845..2550673 (-)	829	Protein_2709	gamma-glutamylcyclotransferase	-
AB2M34_RS13745 (AB2M34_13745)	kinC	2550689..2551975 (-)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
AB2M34_RS13750 (AB2M34_13750)	abrB	2552165..2552443 (-)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
AB2M34_RS13755 (AB2M34_13755)	mreBH	2552727..2553734 (+)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
AB2M34_RS13760 (AB2M34_13760)	ykpC	2553835..2553969 (+)	135	WP_003238865.1	protein YkpC	-
AB2M34_RS13765 (AB2M34_13765)	ampS	2554079..2555311 (+)	1233	WP_003232341.1	aminopeptidase	-
AB2M34_RS13770 (AB2M34_13770)	panEB	2555345..2556256 (-)	912	WP_014479685.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=1023080 AB2M34_RS13750 WP_003244728.1 2552165..2552443(-) (abrB) [Bacillus subtilis strain DYJ24]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=1023080 AB2M34_RS13750 WP_003244728.1 2552165..2552443(-) (abrB) [Bacillus subtilis strain DYJ24]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576