Detailed information
Bioinformatically predicted
Overview
| Name | comEC | Type | Machinery gene |
| Locus tag | AB2M34_RS08755 | Genome accession | NZ_CP161903 |
| Coordinates | 1649545..1651875 (+) | Length | 776 a.a. |
| NCBI ID | WP_046160607.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain DYJ24 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1613746..1653323 | 1649545..1651875 | within | 0 |
Gene organization within MGE regions
Location: 1613746..1653323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M34_RS08510 (AB2M34_08510) | - | 1613746..1613926 (+) | 181 | Protein_1667 | hypothetical protein | - |
| AB2M34_RS08515 (AB2M34_08515) | - | 1614235..1614465 (+) | 231 | WP_224588644.1 | hypothetical protein | - |
| AB2M34_RS08520 (AB2M34_08520) | - | 1614610..1614858 (+) | 249 | Protein_1669 | hypothetical protein | - |
| AB2M34_RS08525 (AB2M34_08525) | - | 1614821..1614943 (+) | 123 | Protein_1670 | RusA family crossover junction endodeoxyribonuclease | - |
| AB2M34_RS08530 (AB2M34_08530) | - | 1615026..1615178 (+) | 153 | WP_049832653.1 | XtrA/YqaO family protein | - |
| AB2M34_RS08535 (AB2M34_08535) | - | 1615317..1615583 (-) | 267 | WP_033881358.1 | hypothetical protein | - |
| AB2M34_RS08540 (AB2M34_08540) | - | 1616200..1616679 (+) | 480 | WP_014480344.1 | hypothetical protein | - |
| AB2M34_RS08545 (AB2M34_08545) | istA | 1616994..1618541 (+) | 1548 | WP_014480339.1 | IS21 family transposase | - |
| AB2M34_RS08550 (AB2M34_08550) | istB | 1618538..1619296 (+) | 759 | WP_014479891.1 | IS21-like element helper ATPase IstB | - |
| AB2M34_RS08555 (AB2M34_08555) | - | 1619558..1619863 (-) | 306 | WP_123772463.1 | hypothetical protein | - |
| AB2M34_RS08560 (AB2M34_08560) | terS | 1619990..1620555 (+) | 566 | Protein_1677 | phage terminase small subunit | - |
| AB2M34_RS08565 (AB2M34_08565) | - | 1620553..1620989 (+) | 437 | Protein_1678 | phage tail tube protein | - |
| AB2M34_RS08570 (AB2M34_08570) | - | 1621276..1621362 (-) | 87 | WP_072592549.1 | putative holin-like toxin | - |
| AB2M34_RS08575 (AB2M34_08575) | - | 1621540..1621637 (+) | 98 | Protein_1680 | N-acetylmuramoyl-L-alanine amidase | - |
| AB2M34_RS08580 (AB2M34_08580) | - | 1622612..1622902 (-) | 291 | WP_129134327.1 | contact-dependent growth inhibition system immunity protein | - |
| AB2M34_RS08585 (AB2M34_08585) | atxG | 1623012..1623589 (-) | 578 | Protein_1682 | suppressor of fused domain protein | - |
| AB2M34_RS08590 (AB2M34_08590) | - | 1623857..1624090 (-) | 234 | WP_224588641.1 | hypothetical protein | - |
| AB2M34_RS08595 (AB2M34_08595) | - | 1624179..1624382 (+) | 204 | WP_123772462.1 | hypothetical protein | - |
| AB2M34_RS08600 (AB2M34_08600) | - | 1624690..1625169 (-) | 480 | WP_250622332.1 | hypothetical protein | - |
| AB2M34_RS08605 (AB2M34_08605) | cdiI | 1625274..1625633 (-) | 360 | WP_014480334.1 | ribonuclease toxin immunity protein CdiI | - |
| AB2M34_RS08610 (AB2M34_08610) | - | 1625730..1626182 (-) | 453 | WP_014480333.1 | SMI1/KNR4 family protein | - |
| AB2M34_RS08615 (AB2M34_08615) | - | 1626281..1626721 (-) | 441 | WP_014480332.1 | SMI1/KNR4 family protein | - |
| AB2M34_RS08620 (AB2M34_08620) | - | 1627124..1627411 (-) | 288 | WP_014480331.1 | hypothetical protein | - |
| AB2M34_RS08625 (AB2M34_08625) | - | 1627425..1629351 (-) | 1927 | Protein_1690 | ribonuclease YeeF family protein | - |
| AB2M34_RS08630 (AB2M34_08630) | - | 1629533..1630660 (+) | 1128 | WP_014480328.1 | Rap family tetratricopeptide repeat protein | - |
| AB2M34_RS08635 (AB2M34_08635) | - | 1631400..1631795 (-) | 396 | WP_046160622.1 | VOC family protein | - |
| AB2M34_RS08640 (AB2M34_08640) | - | 1632737..1633627 (-) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
| AB2M34_RS08645 (AB2M34_08645) | fumC | 1633794..1635182 (+) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| AB2M34_RS08650 (AB2M34_08650) | - | 1635401..1635613 (+) | 213 | Protein_1695 | recombinase family protein | - |
| AB2M34_RS08655 (AB2M34_08655) | - | 1635610..1635708 (-) | 99 | WP_031600702.1 | hypothetical protein | - |
| AB2M34_RS08660 (AB2M34_08660) | sigK | 1635708..1636436 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| AB2M34_RS08665 (AB2M34_08665) | nucA/comI | 1636632..1637042 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| AB2M34_RS08670 (AB2M34_08670) | yqeB | 1637075..1637797 (-) | 723 | WP_014480321.1 | hypothetical protein | - |
| AB2M34_RS08675 (AB2M34_08675) | gnd | 1638038..1638931 (+) | 894 | WP_103330412.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| AB2M34_RS08680 (AB2M34_08680) | yqeD | 1638950..1639576 (-) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| AB2M34_RS08685 (AB2M34_08685) | cwlH | 1639763..1640515 (+) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| AB2M34_RS08690 (AB2M34_08690) | yqeF | 1640767..1641498 (+) | 732 | WP_029317882.1 | SGNH/GDSL hydrolase family protein | - |
| AB2M34_RS08695 (AB2M34_08695) | - | 1641804..1641944 (-) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| AB2M34_RS08700 (AB2M34_08700) | yqeG | 1642306..1642824 (+) | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| AB2M34_RS08705 (AB2M34_08705) | yqeH | 1642828..1643928 (+) | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| AB2M34_RS08710 (AB2M34_08710) | aroE | 1643946..1644788 (+) | 843 | WP_029317883.1 | shikimate dehydrogenase | - |
| AB2M34_RS08715 (AB2M34_08715) | yhbY | 1644782..1645072 (+) | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| AB2M34_RS08720 (AB2M34_08720) | nadD | 1645084..1645653 (+) | 570 | WP_041333756.1 | nicotinate-nucleotide adenylyltransferase | - |
| AB2M34_RS08725 (AB2M34_08725) | yqeK | 1645643..1646203 (+) | 561 | WP_014480316.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| AB2M34_RS08730 (AB2M34_08730) | rsfS | 1646221..1646577 (+) | 357 | WP_014480315.1 | ribosome silencing factor | - |
| AB2M34_RS08735 (AB2M34_08735) | yqeM | 1646574..1647317 (+) | 744 | WP_046160609.1 | class I SAM-dependent methyltransferase | - |
| AB2M34_RS08740 (AB2M34_08740) | comER | 1647383..1648204 (-) | 822 | WP_032726195.1 | late competence protein ComER | - |
| AB2M34_RS08745 (AB2M34_08745) | comEA | 1648288..1648905 (+) | 618 | WP_046160608.1 | competence protein ComEA | Machinery gene |
| AB2M34_RS08750 (AB2M34_08750) | comEB | 1648972..1649541 (+) | 570 | WP_003229978.1 | ComE operon protein 2 | - |
| AB2M34_RS08755 (AB2M34_08755) | comEC | 1649545..1651875 (+) | 2331 | WP_046160607.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| AB2M34_RS08760 (AB2M34_08760) | yqzM | 1651916..1652050 (-) | 135 | WP_003229983.1 | YqzM family protein | - |
| AB2M34_RS08765 (AB2M34_08765) | - | 1652127..1652240 (+) | 114 | WP_122060479.1 | hypothetical protein | - |
| AB2M34_RS08770 (AB2M34_08770) | holA | 1652280..1653323 (+) | 1044 | WP_029317888.1 | DNA polymerase III subunit delta | - |
Sequence
Protein
Download Length: 776 a.a. Molecular weight: 86846.48 Da Isoelectric Point: 7.2477
>NTDB_id=1023062 AB2M34_RS08755 WP_046160607.1 1649545..1651875(+) (comEC) [Bacillus subtilis strain DYJ24]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLRQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKYHKVKRLVIPKGFVSEPKDEKVLQAAREEGVEIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLRQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEILLKYHKVKRLVIPKGFVSEPKDEKVLQAAREEGVEIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN
Nucleotide
Download Length: 2331 bp
>NTDB_id=1023062 AB2M34_RS08755 WP_046160607.1 1649545..1651875(+) (comEC) [Bacillus subtilis strain DYJ24]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAATTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATCCGTCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCTTTGAGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAGCAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGTATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGGCAGCCAGGGAAG
AGGGAGTGGAAATTGAAGAGGTGAAGCGAGGCGATGTGTTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
GCACCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTTTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTGTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGACCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAATTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCGATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATCCGTCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCTTTGAGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGAAGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAGCAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGATTCTGCTGAAGTATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGGCAGCCAGGGAAG
AGGGAGTGGAAATTGAAGAGGTGAAGCGAGGCGATGTGTTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
GCACCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTTTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAAGAGGTGATGAACGTGTTTCCGAATATAAAAGCAGATGTGTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGACCAAAA
CGGAACGATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC | Bacillus subtilis subsp. subtilis str. 168 |
98.711 |
100 |
0.987 |