Detailed information NTG1022985

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AB2M35_RS08385
• Genome accession: NZ_CP161902
• Coordinates: 1603963..1604241 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis strain DYJ22
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1598963..1609241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M35_RS08365 (AB2M35_08365)	-	1599613..1600965 (-)	1353	WP_014478984.1	IS1182 family transposase	-
AB2M35_RS08370 (AB2M35_08370)	ampS	1601095..1602327 (-)	1233	WP_003232341.1	aminopeptidase	-
AB2M35_RS08375 (AB2M35_08375)	ykpC	1602437..1602571 (-)	135	WP_003238865.1	protein YkpC	-
AB2M35_RS08380 (AB2M35_08380)	mreBH	1602672..1603679 (-)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
AB2M35_RS08385 (AB2M35_08385)	abrB	1603963..1604241 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
AB2M35_RS08390 (AB2M35_08390)	kinC	1604431..1605717 (+)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
AB2M35_RS08395 (AB2M35_08395)	ykqA	1605733..1606566 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
AB2M35_RS08400 (AB2M35_08400)	ktrC	1606629..1607294 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
AB2M35_RS08405 (AB2M35_08405)	ade	1607449..1609182 (+)	1734	WP_069837481.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=1022985 AB2M35_RS08385 WP_003244728.1 1603963..1604241(+) (abrB) [Bacillus subtilis strain DYJ22]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=1022985 AB2M35_RS08385 WP_003244728.1 1603963..1604241(+) (abrB) [Bacillus subtilis strain DYJ22]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576