Detailed information NTG1022974

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB2M35_RS06520
• Genome accession: NZ_CP161902
• Coordinates: 1270385..1271338 (+)
• Length: 317 a.a.
• NCBI ID: WP_069837427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DYJ22
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1265385..1276338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M35_RS06490 (AB2M35_06490)	argF	1265926..1266885 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
AB2M35_RS06500 (AB2M35_06500)	yjzC	1268261..1268440 (+)	180	WP_003245356.1	YjzC family protein	-
AB2M35_RS06505 (AB2M35_06505)	yjzD	1268487..1268672 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AB2M35_RS06510 (AB2M35_06510)	-	1268921..1269655 (+)	735	WP_014479433.1	hypothetical protein	-
AB2M35_RS06515 (AB2M35_06515)	-	1269737..1270294 (+)	558	WP_014479435.1	hypothetical protein	-
AB2M35_RS06520 (AB2M35_06520)	med	1270385..1271338 (+)	954	WP_069837427.1	transcriptional regulator Med	Regulator
AB2M35_RS06525 (AB2M35_06525)	comZ	1271353..1271544 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
AB2M35_RS06530 (AB2M35_06530)	yjzB	1271574..1271813 (-)	240	WP_003232972.1	spore coat protein YjzB	-
AB2M35_RS06535 (AB2M35_06535)	fabH	1271978..1272916 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AB2M35_RS06540 (AB2M35_06540)	fabF	1272939..1274180 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AB2M35_RS06545 (AB2M35_06545)	yjaZ	1274256..1275041 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
AB2M35_RS06550 (AB2M35_06550)	appD	1275232..1276218 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1022974 AB2M35_RS06520 WP_069837427.1 1270385..1271338(+) (med) [Bacillus subtilis strain DYJ22]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1022974 AB2M35_RS06520 WP_069837427.1 1270385..1271338(+) (med) [Bacillus subtilis strain DYJ22]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997