Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB2M35_RS02250 Genome accession   NZ_CP161902
Coordinates   468539..469489 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain DYJ22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 463539..474489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M35_RS02225 (AB2M35_02225) rapC 464994..466142 (+) 1149 WP_069837255.1 response regulator aspartate phosphatase RapC Regulator
  AB2M35_RS02230 (AB2M35_02230) phrC 466126..466248 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  AB2M35_RS02235 (AB2M35_02235) yczM 466347..466436 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  AB2M35_RS02240 (AB2M35_02240) yczN 466518..466631 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  AB2M35_RS02245 (AB2M35_02245) thrD 466784..468148 (-) 1365 WP_021481755.1 aspartate kinase -
  AB2M35_RS02250 (AB2M35_02250) ceuB 468539..469489 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  AB2M35_RS02255 (AB2M35_02255) yclO 469482..470429 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  AB2M35_RS02260 (AB2M35_02260) yclP 470423..471181 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  AB2M35_RS02265 (AB2M35_02265) yclQ 471203..472156 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AB2M35_RS02270 (AB2M35_02270) cdaE 472202..473620 (-) 1419 WP_069837256.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=1022965 AB2M35_RS02250 WP_014475804.1 468539..469489(+) (ceuB) [Bacillus subtilis strain DYJ22]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1022965 AB2M35_RS02250 WP_014475804.1 468539..469489(+) (ceuB) [Bacillus subtilis strain DYJ22]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment