Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AB2M35_RS02075 Genome accession   NZ_CP161902
Coordinates   425480..425620 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain DYJ22     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 420480..430620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M35_RS02070 (AB2M35_02070) srfAB 422413..425388 (+) 2976 Protein_364 surfactin non-ribosomal peptide synthetase SrfAB -
  AB2M35_RS02075 (AB2M35_02075) comS 425480..425620 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=1022962 AB2M35_RS02075 WP_225910706.1 425480..425620(+) (comS) [Bacillus subtilis strain DYJ22]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1022962 AB2M35_RS02075 WP_225910706.1 425480..425620(+) (comS) [Bacillus subtilis strain DYJ22]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment