Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AB2M35_RS02040 | Genome accession | NZ_CP161902 |
| Coordinates | 406759..407208 (-) | Length | 149 a.a. |
| NCBI ID | WP_014475770.1 | Uniprot ID | A0A0D1KPR3 |
| Organism | Bacillus subtilis strain DYJ22 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 401759..412208
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB2M35_RS02000 (AB2M35_02000) | - | 402099..402296 (+) | 198 | WP_121509395.1 | hypothetical protein | - |
| AB2M35_RS02005 (AB2M35_02005) | yckC | 402316..402771 (+) | 456 | WP_014478793.1 | RDD family protein | - |
| AB2M35_RS02010 (AB2M35_02010) | yckD | 402853..403185 (+) | 333 | WP_014478794.1 | YckD family protein | - |
| AB2M35_RS02015 (AB2M35_02015) | - | 403313..403735 (+) | 423 | WP_014478795.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| AB2M35_RS02020 (AB2M35_02020) | - | 403723..404043 (+) | 321 | WP_014478796.1 | DUF3147 family protein | - |
| AB2M35_RS02025 (AB2M35_02025) | - | 404062..404791 (+) | 730 | Protein_355 | AAA family ATPase | - |
| AB2M35_RS02030 (AB2M35_02030) | bglC | 404864..406297 (+) | 1434 | WP_014478799.1 | 6-phospho-beta-glucosidase | - |
| AB2M35_RS02035 (AB2M35_02035) | nin/comJ | 406334..406732 (-) | 399 | WP_014478800.1 | DNA-entry nuclease inhibitor | Regulator |
| AB2M35_RS02040 (AB2M35_02040) | nucA/comI | 406759..407208 (-) | 450 | WP_014475770.1 | DNA-entry nuclease | Machinery gene |
| AB2M35_RS02045 (AB2M35_02045) | tlpC | 407376..409097 (-) | 1722 | Protein_359 | methyl-accepting chemotaxis protein TlpC | - |
| AB2M35_RS02050 (AB2M35_02050) | hxlB | 409208..409765 (-) | 558 | WP_014478803.1 | 6-phospho-3-hexuloisomerase | - |
| AB2M35_RS02055 (AB2M35_02055) | hxlA | 409771..410403 (-) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| AB2M35_RS02060 (AB2M35_02060) | hxlR | 410632..410994 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16440.39 Da Isoelectric Point: 4.5282
>NTDB_id=1022961 AB2M35_RS02040 WP_014475770.1 406759..407208(-) (nucA/comI) [Bacillus subtilis strain DYJ22]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1022961 AB2M35_RS02040 WP_014475770.1 406759..407208(-) (nucA/comI) [Bacillus subtilis strain DYJ22]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
98.658 |
100 |
0.987 |