Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STAB902_RS06260 Genome accession   NZ_CP007041
Coordinates   1185478..1185954 (-) Length   158 a.a.
NCBI ID   WP_002984880.1    Uniprot ID   A0A0H2UU18
Organism   Streptococcus pyogenes STAB902     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1180478..1190954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB902_RS06245 (STAB902_06540) fbp54 1181291..1182943 (+) 1653 WP_011054400.1 Rqc2 family fibronectin-binding protein Fbp54 -
  STAB902_RS06250 (STAB902_06545) - 1183002..1184249 (-) 1248 WP_011054399.1 tetratricopeptide repeat protein -
  STAB902_RS06255 (STAB902_06550) - 1184239..1185420 (-) 1182 WP_002990002.1 AI-2E family transporter -
  STAB902_RS06260 (STAB902_06555) mutX 1185478..1185954 (-) 477 WP_002984880.1 NUDIX hydrolase Machinery gene
  STAB902_RS06265 (STAB902_06560) rfbB 1186175..1187215 (-) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  STAB902_RS06270 (STAB902_06565) - 1187459..1188052 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  STAB902_RS06275 (STAB902_06570) rfbA 1188052..1188921 (-) 870 WP_010922195.1 glucose-1-phosphate thymidylyltransferase RfbA -
  STAB902_RS06280 (STAB902_06575) - 1188979..1190085 (-) 1107 WP_011054398.1 NAD(P)/FAD-dependent oxidoreductase -
  STAB902_RS06285 (STAB902_06580) - 1190125..1190913 (-) 789 WP_032463850.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18462.68 Da        Isoelectric Point: 4.3268

>NTDB_id=102293 STAB902_RS06260 WP_002984880.1 1185478..1185954(-) (mutX) [Streptococcus pyogenes STAB902]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=102293 STAB902_RS06260 WP_002984880.1 1185478..1185954(-) (mutX) [Streptococcus pyogenes STAB902]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UU18

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703

Multiple sequence alignment