Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   STAB902_RS04160 Genome accession   NZ_CP007041
Coordinates   778937..779599 (+) Length   220 a.a.
NCBI ID   WP_002995626.1    Uniprot ID   A0A0H2UV22
Organism   Streptococcus pyogenes STAB902     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 773937..784599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB902_RS04140 (STAB902_04340) - 774811..776811 (+) 2001 WP_011054663.1 potassium transporter Kup -
  STAB902_RS04145 (STAB902_04345) - 776835..777113 (-) 279 WP_002989164.1 GIY-YIG nuclease family protein -
  STAB902_RS04150 (STAB902_04350) - 777103..777879 (-) 777 WP_002994360.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  STAB902_RS04155 (STAB902_04355) - 777997..778737 (+) 741 WP_011054661.1 lysophospholipid acyltransferase family protein -
  STAB902_RS04160 (STAB902_04360) comEA/celA/cilE 778937..779599 (+) 663 WP_002995626.1 ComEA family DNA-binding protein Machinery gene
  STAB902_RS04165 (STAB902_04365) comEC/celB 779580..781823 (+) 2244 WP_011106716.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  STAB902_RS04170 (STAB902_04370) holA 781894..782934 (+) 1041 WP_011054659.1 DNA polymerase III subunit delta -
  STAB902_RS04175 (STAB902_04375) sodA 783031..783636 (+) 606 WP_011054658.1 superoxide dismutase SodA -
  STAB902_RS04180 (STAB902_04380) - 783803..784030 (+) 228 WP_011054657.1 hypothetical protein -
  STAB902_RS04185 (STAB902_04385) - 784015..784263 (+) 249 WP_011054656.1 hypothetical protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24623.45 Da        Isoelectric Point: 6.7451

>NTDB_id=102277 STAB902_RS04160 WP_002995626.1 778937..779599(+) (comEA/celA/cilE) [Streptococcus pyogenes STAB902]
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVPALREISPVKQQVSEEKKEIQEDNSILVDLK
GAVQKEGVYKLTASSRVRDVIELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKETASKDQSKVH
INKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=102277 STAB902_RS04160 WP_002995626.1 778937..779599(+) (comEA/celA/cilE) [Streptococcus pyogenes STAB902]
ATGTTAGACGAATTATTAATTAAAGGAAAATCGTTTTTGAGAGAGCGGTATTTTTTGCCATACCTAATTAGTCTTTTATT
AGGACTTTTTCTAATACTAAGCTTCAGTTTTTTGTTCTGGGGAAATAGGCAGAGCAAGGCAGCCGTTCCTGCTTTGAGAG
AAATATCGCCTGTGAAACAGCAGGTTAGTGAAGAAAAAAAGGAAATTCAAGAAGATAATAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAAGAGGGAGTTTATAAGCTAACTGCTAGCAGTCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATTTTGCAGAAAAACTAACTGATGAGCAAGTTGTTTATGTACCTAAACAAG
GAGAAGAGATTTCTGTGCTACCAAGGTCATTAGTTTCTGGTAAAAAAGAAACTGCCAGCAAGGATCAGTCAAAGGTTCAT
ATTAATAAGGCCAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAGAGCTCAGGATATTATTGATATGAG
AGATAAGTTAGGTGGTTTTAAAGCGTTAGAAGATCTCCGTCAGGTTTCGGGGATTGGCGAAAAAACGCTCGAGAAATTAA
AAGATGACATTTTCTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-130)

Helix-hairpin-helix motif (HHH_3)

(156-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UV22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.995

94.091

0.405

Multiple sequence alignment