Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | R2J73_RS07840 | Genome accession | NZ_AP027744 |
| Coordinates | 1649391..1650749 (-) | Length | 452 a.a. |
| NCBI ID | WP_316269539.1 | Uniprot ID | - |
| Organism | Claveliimonas bilis strain 9CFEGH4 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1644391..1655749
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2J73_RS07835 | - | 1649202..1649330 (-) | 129 | WP_316269537.1 | hypothetical protein | - |
| R2J73_RS07840 (Lac2_15810) | radA | 1649391..1650749 (-) | 1359 | WP_316269539.1 | DNA repair protein RadA | Machinery gene |
| R2J73_RS07845 (Lac2_15820) | - | 1650801..1651361 (-) | 561 | WP_316269540.1 | XRE family transcriptional regulator | - |
| R2J73_RS07850 (Lac2_15830) | - | 1651540..1652037 (+) | 498 | WP_316265456.1 | GNAT family N-acetyltransferase | - |
| R2J73_RS07855 (Lac2_15840) | - | 1652118..1652531 (-) | 414 | WP_256195642.1 | endosialidase | - |
| R2J73_RS07860 (Lac2_15850) | - | 1652590..1655025 (-) | 2436 | WP_316269542.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| R2J73_RS07865 (Lac2_15860) | - | 1655104..1655472 (-) | 369 | WP_230105283.1 | GntR family transcriptional regulator | - |
Sequence
Protein
Download Length: 452 a.a. Molecular weight: 49323.91 Da Isoelectric Point: 6.6392
>NTDB_id=102272 R2J73_RS07840 WP_316269539.1 1649391..1650749(-) (radA) [Claveliimonas bilis strain 9CFEGH4]
MAKAKKTIFFCQNCGHEESKWLGQCPACREWNTFVEEKITPVKGAAAGKSVREGEVVTLSSVRTDGEERIKTDIQELDRV
LGGGIVPGSLVLVGGDPGIGKSTLLLQVCQKLSEKKESVLYISGEESLKQIKLRADRMGKFSEDLLLLCETNLETIRQTI
ERQKPHLAIIDSIQTMYSEEIGSAPGSVSQVREATNTFMQLAKGLGISIFIVGHVTKEGTVAGPRVLEHMVDTVLYFEGD
RHASYRILRGVKNRFGSTNEIGVFEMRQTGLEEVANPSEFMLSGKPENASGSVVACSMEGTRPILMEIQALVCASNFGFP
RRTAAGTDYNRVNLLMAVLEKRMGLPLSNYDAYVNIAGGIRMNEPAVDLGIVMAIFSSYKNRPVPEDMIVFGEVGLSGEV
RAVSMPEQRVSEAKKLGFKTCVIPSVSENAVKNIEGIRVIGVRSVSEAIQLL
MAKAKKTIFFCQNCGHEESKWLGQCPACREWNTFVEEKITPVKGAAAGKSVREGEVVTLSSVRTDGEERIKTDIQELDRV
LGGGIVPGSLVLVGGDPGIGKSTLLLQVCQKLSEKKESVLYISGEESLKQIKLRADRMGKFSEDLLLLCETNLETIRQTI
ERQKPHLAIIDSIQTMYSEEIGSAPGSVSQVREATNTFMQLAKGLGISIFIVGHVTKEGTVAGPRVLEHMVDTVLYFEGD
RHASYRILRGVKNRFGSTNEIGVFEMRQTGLEEVANPSEFMLSGKPENASGSVVACSMEGTRPILMEIQALVCASNFGFP
RRTAAGTDYNRVNLLMAVLEKRMGLPLSNYDAYVNIAGGIRMNEPAVDLGIVMAIFSSYKNRPVPEDMIVFGEVGLSGEV
RAVSMPEQRVSEAKKLGFKTCVIPSVSENAVKNIEGIRVIGVRSVSEAIQLL
Nucleotide
Download Length: 1359 bp
>NTDB_id=102272 R2J73_RS07840 WP_316269539.1 1649391..1650749(-) (radA) [Claveliimonas bilis strain 9CFEGH4]
GTGGCAAAAGCGAAAAAGACAATTTTTTTCTGCCAGAACTGCGGACATGAAGAGAGCAAATGGCTGGGACAGTGTCCGGC
ATGTCGGGAGTGGAATACATTTGTAGAAGAAAAGATCACGCCGGTAAAAGGCGCGGCAGCAGGGAAAAGTGTAAGGGAAG
GGGAAGTAGTCACTCTTTCCAGTGTGAGAACCGACGGTGAAGAGAGGATAAAGACAGATATACAGGAACTGGATCGTGTG
CTGGGAGGGGGAATTGTCCCTGGTTCTCTCGTGTTGGTGGGAGGAGATCCGGGAATCGGTAAATCAACCCTTCTCCTTCA
GGTATGCCAAAAGCTGTCCGAAAAAAAAGAAAGCGTACTTTATATTTCCGGGGAAGAGTCGCTGAAGCAGATAAAACTTA
GAGCTGACCGCATGGGGAAATTTTCAGAAGATCTGCTTCTTCTGTGTGAGACGAATCTGGAAACGATCCGGCAGACCATT
GAGAGGCAGAAGCCCCATCTTGCGATCATTGATTCTATACAGACAATGTACAGCGAAGAGATAGGCTCTGCTCCGGGAAG
TGTTTCCCAGGTAAGAGAGGCAACGAATACGTTTATGCAGCTTGCCAAGGGACTGGGGATTTCTATTTTTATAGTAGGTC
ATGTGACAAAAGAAGGAACAGTGGCCGGCCCCAGGGTATTGGAGCATATGGTAGATACAGTGCTGTATTTTGAGGGGGAT
CGGCATGCTTCCTACCGGATTTTGCGGGGAGTGAAAAACCGTTTTGGCTCCACCAATGAGATCGGTGTGTTTGAAATGCG
TCAGACAGGGCTGGAAGAAGTGGCGAACCCGTCGGAATTTATGCTGAGTGGAAAGCCGGAAAATGCTTCGGGATCTGTGG
TGGCATGTTCTATGGAAGGGACAAGGCCTATTTTGATGGAAATACAGGCTCTGGTCTGTGCCAGCAATTTCGGTTTCCCG
AGAAGAACGGCAGCAGGGACAGACTACAACAGAGTGAATCTCCTTATGGCGGTACTGGAAAAGCGCATGGGACTTCCGCT
TTCCAACTATGATGCCTATGTCAATATTGCCGGAGGGATCCGGATGAATGAACCGGCAGTGGATCTGGGTATTGTCATGG
CAATTTTCTCAAGTTATAAAAACCGCCCGGTGCCGGAGGATATGATCGTCTTCGGTGAAGTGGGATTAAGCGGCGAAGTC
CGCGCAGTGAGTATGCCGGAGCAGAGAGTGTCAGAGGCAAAGAAGCTGGGATTTAAGACATGTGTAATTCCATCGGTATC
TGAAAATGCAGTGAAAAATATAGAAGGCATCCGGGTGATCGGGGTGAGAAGTGTCAGTGAGGCGATTCAGCTGTTGTAG
GTGGCAAAAGCGAAAAAGACAATTTTTTTCTGCCAGAACTGCGGACATGAAGAGAGCAAATGGCTGGGACAGTGTCCGGC
ATGTCGGGAGTGGAATACATTTGTAGAAGAAAAGATCACGCCGGTAAAAGGCGCGGCAGCAGGGAAAAGTGTAAGGGAAG
GGGAAGTAGTCACTCTTTCCAGTGTGAGAACCGACGGTGAAGAGAGGATAAAGACAGATATACAGGAACTGGATCGTGTG
CTGGGAGGGGGAATTGTCCCTGGTTCTCTCGTGTTGGTGGGAGGAGATCCGGGAATCGGTAAATCAACCCTTCTCCTTCA
GGTATGCCAAAAGCTGTCCGAAAAAAAAGAAAGCGTACTTTATATTTCCGGGGAAGAGTCGCTGAAGCAGATAAAACTTA
GAGCTGACCGCATGGGGAAATTTTCAGAAGATCTGCTTCTTCTGTGTGAGACGAATCTGGAAACGATCCGGCAGACCATT
GAGAGGCAGAAGCCCCATCTTGCGATCATTGATTCTATACAGACAATGTACAGCGAAGAGATAGGCTCTGCTCCGGGAAG
TGTTTCCCAGGTAAGAGAGGCAACGAATACGTTTATGCAGCTTGCCAAGGGACTGGGGATTTCTATTTTTATAGTAGGTC
ATGTGACAAAAGAAGGAACAGTGGCCGGCCCCAGGGTATTGGAGCATATGGTAGATACAGTGCTGTATTTTGAGGGGGAT
CGGCATGCTTCCTACCGGATTTTGCGGGGAGTGAAAAACCGTTTTGGCTCCACCAATGAGATCGGTGTGTTTGAAATGCG
TCAGACAGGGCTGGAAGAAGTGGCGAACCCGTCGGAATTTATGCTGAGTGGAAAGCCGGAAAATGCTTCGGGATCTGTGG
TGGCATGTTCTATGGAAGGGACAAGGCCTATTTTGATGGAAATACAGGCTCTGGTCTGTGCCAGCAATTTCGGTTTCCCG
AGAAGAACGGCAGCAGGGACAGACTACAACAGAGTGAATCTCCTTATGGCGGTACTGGAAAAGCGCATGGGACTTCCGCT
TTCCAACTATGATGCCTATGTCAATATTGCCGGAGGGATCCGGATGAATGAACCGGCAGTGGATCTGGGTATTGTCATGG
CAATTTTCTCAAGTTATAAAAACCGCCCGGTGCCGGAGGATATGATCGTCTTCGGTGAAGTGGGATTAAGCGGCGAAGTC
CGCGCAGTGAGTATGCCGGAGCAGAGAGTGTCAGAGGCAAAGAAGCTGGGATTTAAGACATGTGTAATTCCATCGGTATC
TGAAAATGCAGTGAAAAATATAGAAGGCATCCGGGTGATCGGGGTGAGAAGTGTCAGTGAGGCGATTCAGCTGTTGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
58.022 |
100 |
0.584 |
| radA | Streptococcus mitis NCTC 12261 |
54.545 |
99.779 |
0.544 |
| radA | Streptococcus pneumoniae Rx1 |
54.545 |
99.779 |
0.544 |
| radA | Streptococcus pneumoniae D39 |
54.545 |
99.779 |
0.544 |
| radA | Streptococcus pneumoniae R6 |
54.545 |
99.779 |
0.544 |
| radA | Streptococcus pneumoniae TIGR4 |
54.545 |
99.779 |
0.544 |
| radA | Streptococcus mitis SK321 |
54.545 |
99.779 |
0.544 |