Detailed information NTG1022698

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM37_RS04595
• Genome accession: NZ_LS483394
• Coordinates: 891032..892102 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC10880
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 886032..897102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM37_RS04575 (NCTC10880_00911)	citX	886612..887190 (+)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-
DQM37_RS04580 (NCTC10880_00912)	-	887205..888599 (+)	1395	WP_172451594.1	oxaloacetate decarboxylase subunit alpha	-
DQM37_RS04585 (NCTC10880_00913)	citC	888709..889761 (-)	1053	WP_111694819.1	[citrate (pro-3S)-lyase] ligase	-
DQM37_RS04590 (NCTC10880_00914)	-	889850..890332 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
DQM37_RS04595 (NCTC10880_00915)	xerS	891032..892102 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQM37_RS04600 (NCTC10880_00916)	-	892577..893275 (+)	699	WP_111694820.1	XRE family transcriptional regulator	-
DQM37_RS04605 (NCTC10880_00917)	ffh	893392..894954 (-)	1563	WP_111694821.1	signal recognition particle protein	-
DQM37_RS04610 (NCTC10880_00918)	-	894969..895301 (-)	333	WP_002989745.1	putative DNA-binding protein	-
DQM37_RS04615 (NCTC10880_00919)	-	895399..896097 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1022698 DQM37_RS04595 WP_002984598.1 891032..892102(-) (xerS) [Streptococcus pyogenes strain NCTC10880]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1022698 DQM37_RS04595 WP_002984598.1 891032..892102(-) (xerS) [Streptococcus pyogenes strain NCTC10880]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
AGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTGGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806