Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AB1395_RS02530 Genome accession   NZ_CP161815
Coordinates   487215..488294 (+) Length   359 a.a.
NCBI ID   WP_367783748.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SS-15     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 482215..493294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1395_RS02500 (AB1395_02500) - 482933..483115 (+) 183 WP_218654102.1 DUF6440 family protein -
  AB1395_RS02505 (AB1395_02505) - 483398..483913 (+) 516 WP_218654103.1 GNAT family N-acetyltransferase -
  AB1395_RS02510 (AB1395_02510) - 483957..485054 (+) 1098 WP_278025038.1 MmcQ/YjbR family DNA-binding protein -
  AB1395_RS02515 (AB1395_02515) - 485208..486116 (-) 909 WP_256866669.1 diacylglycerol kinase family protein -
  AB1395_RS02520 (AB1395_02520) rsmD 486205..486744 (+) 540 WP_278025039.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AB1395_RS02525 (AB1395_02525) coaD 486734..487234 (+) 501 WP_104967398.1 pantetheine-phosphate adenylyltransferase -
  AB1395_RS02530 (AB1395_02530) sepM 487215..488294 (+) 1080 WP_367783748.1 SepM family pheromone-processing serine protease Regulator
  AB1395_RS02535 (AB1395_02535) - 488563..489546 (+) 984 WP_218654109.1 LacI family DNA-binding transcriptional regulator -
  AB1395_RS02540 (AB1395_02540) rbsK 489539..490450 (+) 912 WP_367783751.1 ribokinase -
  AB1395_RS02545 (AB1395_02545) rbsD 490425..490823 (+) 399 WP_218654111.1 D-ribose pyranase -
  AB1395_RS02550 (AB1395_02550) - 490836..492314 (+) 1479 WP_367783753.1 sugar ABC transporter ATP-binding protein -
  AB1395_RS02555 (AB1395_02555) rbsC 492316..493260 (+) 945 WP_218654113.1 ribose ABC transporter permease -

Sequence


Protein


Download         Length: 359 a.a.        Molecular weight: 39675.28 Da        Isoelectric Point: 5.3441

>NTDB_id=1022581 AB1395_RS02530 WP_367783748.1 487215..488294(+) (sepM) [Streptococcus pluranimalium strain SS-15]
MNKQEFKVIEENPKKNSPLKWWLLGIGTAILLAVAFFLPLPYYIEMPGGAYDIRDVLEVDDKEDTAKGSYNFVAISQMQA
TPVALLYTWATPFTDISTAKESLGNYTEEEYIRLNQFYMETSQNEAIYQAFKLADKPVDLKYFGVYVLDVAKHSTFKGIL
GLADTVTGVNGKTFESSKELIDYVAKQKIGDKVTVQYLSDGKEKEASGKIIKLDNGKNGIGIGLVDHTEVETKTPVHFST
GNVGGPSAGLMFTLDILDQINEEDLRKGRMIAGTGTIEKDGSVGDIGGADKKVVSAAKDKAEIFFVPNNPLPKSYLKEHP
DAKTNYQEAKEAAKRIKTDMKIIPVKNVQDAIDYLKKTS

Nucleotide


Download         Length: 1080 bp        

>NTDB_id=1022581 AB1395_RS02530 WP_367783748.1 487215..488294(+) (sepM) [Streptococcus pluranimalium strain SS-15]
GTGAACAAACAAGAATTTAAAGTCATTGAGGAAAACCCTAAAAAGAATTCCCCTTTAAAATGGTGGTTACTGGGAATTGG
AACAGCTATATTACTGGCTGTTGCCTTCTTTCTCCCGCTGCCTTATTACATTGAAATGCCTGGGGGAGCCTATGATATTC
GTGATGTTTTAGAGGTTGATGACAAAGAAGATACAGCTAAAGGTTCTTATAATTTTGTCGCGATTTCTCAAATGCAAGCA
ACCCCGGTCGCTTTACTTTATACTTGGGCAACTCCTTTTACCGATATTTCAACTGCTAAGGAAAGTTTGGGAAATTATAC
CGAAGAGGAGTACATTCGCCTCAATCAGTTTTATATGGAAACGTCACAAAATGAAGCGATCTACCAAGCTTTTAAATTAG
CTGACAAACCTGTAGACTTAAAATACTTCGGTGTTTATGTTTTGGATGTTGCTAAGCACTCTACTTTTAAAGGAATTCTA
GGTTTAGCAGATACTGTTACCGGTGTTAATGGTAAAACCTTTGAAAGTTCTAAGGAACTTATTGATTACGTTGCCAAACA
AAAGATTGGGGATAAGGTGACCGTACAATATTTATCTGATGGCAAAGAAAAAGAAGCTTCTGGTAAAATCATTAAGCTAG
ATAATGGCAAAAATGGAATTGGAATAGGACTCGTAGATCATACCGAAGTTGAAACAAAAACGCCAGTTCATTTTTCAACA
GGCAATGTTGGTGGACCGAGTGCAGGTCTTATGTTTACCTTGGATATTCTAGATCAAATCAATGAAGAAGATTTGAGAAA
AGGACGTATGATTGCAGGTACTGGAACGATTGAAAAAGACGGTTCAGTCGGTGATATTGGTGGTGCGGATAAGAAGGTTG
TTTCAGCAGCTAAAGATAAGGCTGAGATTTTCTTTGTTCCAAACAATCCCCTCCCAAAATCTTATTTAAAAGAACACCCA
GATGCTAAAACCAATTATCAGGAAGCCAAAGAAGCTGCTAAGCGTATCAAGACGGACATGAAAATTATTCCAGTCAAGAA
TGTTCAGGATGCGATTGACTACTTGAAAAAAACGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.826

95.822

0.621


Multiple sequence alignment