Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB1N68_RS01780 Genome accession   NZ_CP161342
Coordinates   408234..408635 (+) Length   133 a.a.
NCBI ID   WP_196132419.1    Uniprot ID   -
Organism   Pseudomonas fulva strain NY14325     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 403234..413635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1N68_RS01750 (AB1N68_01750) - 403365..404369 (-) 1005 WP_023533059.1 aspartate carbamoyltransferase catalytic subunit -
  AB1N68_RS01755 (AB1N68_01755) pyrR 404382..404900 (-) 519 WP_145127215.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB1N68_RS01760 (AB1N68_01760) ruvX 404950..405387 (-) 438 WP_367598651.1 Holliday junction resolvase RuvX -
  AB1N68_RS01765 (AB1N68_01765) - 405387..405956 (-) 570 WP_023532990.1 YqgE/AlgH family protein -
  AB1N68_RS01770 (AB1N68_01770) - 406003..406902 (-) 900 WP_027914038.1 energy transducer TonB -
  AB1N68_RS01775 (AB1N68_01775) gshB 407042..407995 (-) 954 WP_145127219.1 glutathione synthase -
  AB1N68_RS01780 (AB1N68_01780) pilG 408234..408635 (+) 402 WP_196132419.1 PleD family two-component system response regulator Regulator
  AB1N68_RS01785 (AB1N68_01785) pilH 408684..409049 (+) 366 WP_196132420.1 twitching motility response regulator PilH -
  AB1N68_RS01790 (AB1N68_01790) - 409046..409597 (+) 552 WP_196132421.1 chemotaxis protein CheW -
  AB1N68_RS01795 (AB1N68_01795) - 409646..411670 (+) 2025 WP_235166498.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14529.79 Da        Isoelectric Point: 5.1550

>NTDB_id=1022404 AB1N68_RS01780 WP_196132419.1 408234..408635(+) (pilG) [Pseudomonas fulva strain NY14325]
MEQPLKVMVIDDSRTIRRTAQMLLGEVGCEVITASDGFDALAKIVDHNPAVIFVDVLMPRLDGYQTCAVIKQNSTFKDVP
VILLSSRDGVFDKARGRVVGSDQFLTKPFTKEELIEAIQAHVPGFAAAQQTAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1022404 AB1N68_RS01780 WP_196132419.1 408234..408635(+) (pilG) [Pseudomonas fulva strain NY14325]
ATGGAACAACCCCTGAAAGTGATGGTGATCGACGATTCACGCACCATTCGCCGCACGGCCCAGATGCTACTCGGTGAGGT
GGGCTGCGAGGTCATCACTGCCAGCGATGGCTTCGATGCCTTGGCCAAGATCGTCGATCACAACCCGGCCGTGATCTTTG
TCGATGTCTTGATGCCGCGCCTGGACGGCTACCAGACGTGCGCGGTGATCAAGCAGAACAGCACCTTCAAGGACGTCCCG
GTGATTCTGTTGTCGTCGCGCGACGGTGTGTTCGACAAGGCCCGCGGGCGTGTGGTCGGTTCTGATCAGTTTCTGACCAA
ACCGTTTACCAAGGAAGAGCTGATCGAGGCAATACAGGCCCATGTGCCTGGGTTTGCCGCTGCTCAACAAACAGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

90.226

0.602

Multiple sequence alignment