Detailed information NTG1022065

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ABZM97_RS19450
• Genome accession: NZ_CP160797
• Coordinates: 3888303..3889448 (+)
• Length: 381 a.a.
• NCBI ID: WP_087992747.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3883303..3894448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS19430 (ABZM97_19430)	-	3883314..3884594 (+)	1281	WP_087992743.1	pitrilysin family protein	-
ABZM97_RS19435 (ABZM97_19435)	-	3884591..3885292 (+)	702	WP_087992744.1	bacteriocin biosynthesis protein AlbG	-
ABZM97_RS19440 (ABZM97_19440)	-	3885298..3886674 (-)	1377	WP_087992745.1	YncE family protein	-
ABZM97_RS19445 (ABZM97_19445)	-	3886714..3888075 (-)	1362	WP_087992746.1	YncE family protein	-
ABZM97_RS19450 (ABZM97_19450)	rapF	3888303..3889448 (+)	1146	WP_087992747.1	aspartate phosphatase	Regulator
ABZM97_RS19455 (ABZM97_19455)	speB	3889594..3890466 (-)	873	WP_202327904.1	agmatinase	-
ABZM97_RS19460 (ABZM97_19460)	speE	3890527..3891357 (-)	831	WP_003222027.1	spermidine synthase	-
ABZM97_RS19465 (ABZM97_19465)	-	3891559..3893634 (+)	2076	WP_202327903.1	transglycosylase domain-containing protein	-
ABZM97_RS19470 (ABZM97_19470)	-	3893662..3894096 (-)	435	WP_087992750.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45545.93 Da
• Isoelectric Point: 5.0421

>NTDB_id=1022065 ABZM97_RS19450 WP_087992747.1 3888303..3889448(+) (rapF) [Bacillus vallismortis strain BL-01]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLVEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSEVYYYMKQTYVS
MDYARQAYEIYNDQTAYDIRLTQCHSLFGANFLDLKQYEHAISHFQKAFSMADAEQQPQLMGRTLYNVALCHNNQKDFQN
AVDHLVRAITVFENAEIINSLPQPYFLITQIYYNLGNVLKAEEYYNRGLAHSLKAEDTVYLHKFEFLKSLHLSGPDEEQI
NKCFLFLESKLMYADMEDLALDAAKYYYKLEDFKKASAYFLKVEDIRQHIQGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1022065 ABZM97_RS19450 WP_087992747.1 3888303..3889448(+) (rapF) [Bacillus vallismortis strain BL-01]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAGTATTTACGAAGAGAAATCAAACAAGAGCTGGACCAAATGGAAGAAGATCAGGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGCGG
CTGTCTGATTTGCTGGTTGAGATTGATAAAAAACAGGCTCGTTTGACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAGCTTGACCAGCGGGAATATCTGTCGGCCATTAAATTTTTCAAAAAGGCCGAAAGCAAGTTGATATTCG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAGGTTTACTATTATATGAAACAAACTTATGTATCA
ATGGATTATGCTAGACAAGCGTATGAAATTTATAATGATCAGACTGCATATGACATAAGGCTTACTCAGTGTCACTCCTT
GTTTGGAGCAAATTTCTTGGATCTAAAACAATATGAACATGCGATATCTCATTTTCAAAAAGCTTTCTCGATGGCTGATG
CGGAACAGCAGCCTCAATTAATGGGAAGAACTCTATATAATGTTGCGCTTTGTCATAATAACCAAAAAGACTTTCAAAAT
GCTGTGGATCACTTGGTAAGAGCTATAACTGTATTTGAGAATGCAGAAATCATAAATTCCCTTCCTCAGCCATACTTCTT
AATTACACAAATATATTATAATTTAGGTAATGTGTTAAAAGCAGAAGAATATTATAATAGGGGATTGGCTCATTCTCTAA
AAGCTGAGGACACTGTTTATCTACACAAGTTCGAATTTTTAAAATCTTTACACTTATCCGGTCCTGATGAAGAACAAATT
AATAAATGTTTTCTTTTCCTTGAAAGTAAATTGATGTACGCTGATATGGAAGATTTAGCCCTTGATGCAGCTAAATACTA
CTATAAATTAGAGGATTTTAAAAAAGCCTCCGCTTATTTTTTGAAAGTTGAAGATATCAGACAGCACATCCAAGGAGGAG
TGAATTTGTATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.528	100	0.795
rapC	Bacillus subtilis subsp. subtilis str. 168	56.579	99.738	0.564