Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ABZM97_RS07840 Genome accession   NZ_CP160797
Coordinates   1541371..1541964 (+) Length   197 a.a.
NCBI ID   WP_087992236.1    Uniprot ID   -
Organism   Bacillus vallismortis strain BL-01     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1536371..1546964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZM97_RS07815 (ABZM97_07815) - 1537134..1538258 (+) 1125 WP_087991031.1 N-acetyldiaminopimelate deacetylase -
  ABZM97_RS07820 (ABZM97_07820) - 1538320..1538565 (+) 246 WP_087991032.1 YkuS family protein -
  ABZM97_RS07825 (ABZM97_07825) - 1538803..1539606 (-) 804 WP_087991033.1 mechanosensitive ion channel family protein -
  ABZM97_RS07830 (ABZM97_07830) ahpA 1539851..1540393 (+) 543 WP_087991034.1 biofilm-specific peroxidase AhpA -
  ABZM97_RS07835 (ABZM97_07835) - 1540462..1540920 (+) 459 WP_367387371.1 TlpA disulfide reductase family protein -
  ABZM97_RS07840 (ABZM97_07840) rok 1541371..1541964 (+) 594 WP_087992236.1 transcriptional regulator Rok Regulator
  ABZM97_RS07845 (ABZM97_07845) - 1542007..1542972 (-) 966 WP_087992235.1 sporulation protein -
  ABZM97_RS07850 (ABZM97_07850) - 1543108..1543707 (+) 600 WP_087992234.1 molybdenum cofactor guanylyltransferase -
  ABZM97_RS07855 (ABZM97_07855) - 1543758..1544777 (+) 1020 WP_087992233.1 MoeB/ThiF family adenylyltransferase -
  ABZM97_RS07860 (ABZM97_07860) glp 1544795..1546087 (+) 1293 WP_087992232.1 gephyrin-like molybdotransferase Glp -
  ABZM97_RS07865 (ABZM97_07865) mobB 1546048..1546569 (+) 522 WP_202328619.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 197 a.a.        Molecular weight: 22319.30 Da        Isoelectric Point: 9.7037

>NTDB_id=1022022 ABZM97_RS07840 WP_087992236.1 1541371..1541964(+) (rok) [Bacillus vallismortis strain BL-01]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPHS
QQQSVQPQLQSASSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIEPAESAESAESANG

Nucleotide


Download         Length: 594 bp        

>NTDB_id=1022022 ABZM97_RS07840 WP_087992236.1 1541371..1541964(+) (rok) [Bacillus vallismortis strain BL-01]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTTC
GTTCTGAAAAAAAACCTGACTCTTTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCACTCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTGCTTCCTCCCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCCGGATCAAAAGCAGCTAAGCTGCGCGAAGCTGCCATTAAAACCTTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTCATGCAA
AGCTTAATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATCGAACCTGCAGA
ATCAGCTGAATCTGCAGAATCAGCAAATGGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

95.939

0.944

Multiple sequence alignment