Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ABZM97_RS07735 Genome accession   NZ_CP160797
Coordinates   1525120..1525584 (-) Length   154 a.a.
NCBI ID   WP_087991019.1    Uniprot ID   -
Organism   Bacillus vallismortis strain BL-01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1520120..1530584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZM97_RS07715 (ABZM97_07715) kinA 1520585..1522405 (+) 1821 WP_253269050.1 sporulation histidine kinase KinA -
  ABZM97_RS07720 (ABZM97_07720) - 1522415..1523596 (-) 1182 WP_087991016.1 aminotransferase A -
  ABZM97_RS07725 (ABZM97_07725) - 1523798..1523959 (-) 162 WP_087991017.1 hypothetical protein -
  ABZM97_RS07730 (ABZM97_07730) cheV 1524166..1525077 (+) 912 WP_087991018.1 chemotaxis protein CheV -
  ABZM97_RS07735 (ABZM97_07735) kre 1525120..1525584 (-) 465 WP_087991019.1 YkyB family protein Regulator
  ABZM97_RS07740 (ABZM97_07740) - 1525721..1527013 (-) 1293 WP_087991020.1 MFS transporter -
  ABZM97_RS07745 (ABZM97_07745) - 1527089..1527583 (-) 495 WP_087991048.1 L,D-transpeptidase family protein -
  ABZM97_RS07750 (ABZM97_07750) - 1527641..1528501 (-) 861 WP_087991021.1 metallophosphoesterase -
  ABZM97_RS07755 (ABZM97_07755) fadH 1528644..1529408 (+) 765 WP_087991022.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17899.69 Da        Isoelectric Point: 10.3545

>NTDB_id=1022021 ABZM97_RS07735 WP_087991019.1 1525120..1525584(-) (kre) [Bacillus vallismortis strain BL-01]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1022021 ABZM97_RS07735 WP_087991019.1 1525120..1525584(-) (kre) [Bacillus vallismortis strain BL-01]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACAGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAGGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGA
CAAATCGCCAGCAGCCAGCTTATCATAAACCCGTCTTTAAAAAACTCGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment