Detailed information NTG1022012

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABZM97_RS06245
• Genome accession: NZ_CP160797
• Coordinates: 1255988..1256941 (+)
• Length: 317 a.a.
• NCBI ID: WP_087993451.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1250988..1261941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS06220 (ABZM97_06220)	argF	1252823..1253782 (+)	960	WP_367387311.1	ornithine carbamoyltransferase	-
ABZM97_RS06225 (ABZM97_06225)	-	1253863..1254042 (+)	180	WP_087993455.1	YjzC family protein	-
ABZM97_RS06230 (ABZM97_06230)	-	1254089..1254274 (-)	186	WP_087993454.1	YjzD family protein	-
ABZM97_RS06235 (ABZM97_06235)	-	1254522..1255256 (+)	735	WP_367387312.1	hypothetical protein	-
ABZM97_RS06240 (ABZM97_06240)	-	1255337..1255897 (+)	561	WP_087993452.1	hypothetical protein	-
ABZM97_RS06245 (ABZM97_06245)	med	1255988..1256941 (+)	954	WP_087993451.1	transcriptional regulator Med	Regulator
ABZM97_RS06250 (ABZM97_06250)	comZ	1256956..1257147 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABZM97_RS06255 (ABZM97_06255)	-	1257177..1257404 (-)	228	WP_087993449.1	hypothetical protein	-
ABZM97_RS06260 (ABZM97_06260)	fabH	1257568..1258506 (+)	939	WP_087993448.1	beta-ketoacyl-ACP synthase III	-
ABZM97_RS06265 (ABZM97_06265)	fabF	1258529..1259770 (+)	1242	WP_087993447.1	beta-ketoacyl-ACP synthase II	-
ABZM97_RS06270 (ABZM97_06270)	-	1259848..1260633 (+)	786	WP_087993446.1	DUF2268 domain-containing protein	-
ABZM97_RS06275 (ABZM97_06275)	appD	1260824..1261810 (+)	987	WP_087993445.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35291.88 Da
• Isoelectric Point: 4.7988

>NTDB_id=1022012 ABZM97_RS06245 WP_087993451.1 1255988..1256941(+) (med) [Bacillus vallismortis strain BL-01]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKGDNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTAHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSEL
GENTVLTSTVQNVDKAYEIIAEQFNKGSLEGGDHYYDLKTGVVEMGTFSPLVDKDFQHRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1022012 ABZM97_RS06245 WP_087993451.1 1255988..1256941(+) (med) [Bacillus vallismortis strain BL-01]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAACGATCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGCGGGGCGTCAATCTTCTCTATGGCCACGGGAGTGAATATGCAGAAGTGTTTAACTTGGTCAGCGAAGATTA
TCCGGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGGCGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGCTTTTTTGGAGGAATGACAGCTGCCCATATGTCGAAAACAAATCAGGTCGGCGTCATTGCTTCCTTTACGTGGCAG
CCAGAGGTTGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGGATATAGAAGTAAACACGAAATATACGGCTCATTG
GGATGATGATACGACGGCAGTAAAGCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCTGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTCTATGCCATCGGCTACGTCACAGATCAATCAGAACTG
GGTGAGAATACCGTATTAACCAGCACTGTGCAAAATGTGGACAAGGCCTATGAAATCATCGCTGAGCAATTCAACAAAGG
CTCCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACCGGAGTTGTTGAAATGGGAACATTCAGCCCGCTAGTCGATA
AAGACTTTCAGCATAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	97.161	100	0.972