Detailed information NTG1022010

Bioinformatically predicted

Overview

• Name: addB
• Type: Machinery gene
• Locus tag: ABZM97_RS05895
• Genome accession: NZ_CP160797
• Coordinates: 1185728..1189228 (+)
• Length: 1166 a.a.
• NCBI ID: WP_253268994.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain BL-01
• Function: homologous recombination; plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 1180728..1194228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZM97_RS05880 (ABZM97_05880)	-	1181847..1183049 (-)	1203	WP_087993649.1	MFS transporter	-
ABZM97_RS05885 (ABZM97_05885)	-	1183163..1184890 (+)	1728	WP_253268992.1	ABC transporter substrate-binding protein	-
ABZM97_RS05890 (ABZM97_05890)	-	1185079..1185543 (-)	465	WP_253268993.1	ferritin family protein	-
ABZM97_RS05895 (ABZM97_05895)	addB	1185728..1189228 (+)	3501	WP_253268994.1	helicase-exonuclease AddAB subunit AddB	Machinery gene
ABZM97_RS05900 (ABZM97_05900)	addA	1189215..1192919 (+)	3705	WP_367387301.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
ABZM97_RS05905 (ABZM97_05905)	sbcD	1192994..1194169 (+)	1176	WP_253268996.1	exonuclease subunit SbcD	-

Sequence

Protein

• Length: 1166 a.a.
• Molecular weight: 134543.41 Da
• Isoelectric Point: 5.4734

>NTDB_id=1022010 ABZM97_RS05895 WP_253268994.1 1185728..1189228(+) (addB) [Bacillus vallismortis strain BL-01]
MGAEFLVGRSGSGKTKLIIDSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGMIRAQVFSFSRLAWRVLQHTG
GMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFTAQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSE
KLHDLSILYQQMEKSLSDQYLHSEDYLTLLSEHIPLAEDIKGAHIYVDGFYQFTPQEFRVLEQLMVHAEHITFSLTADKP
SYEREPHELELFRMTGKAYYRLHQKAKELNLDITYKELNGTERHTQAPELAHLEAQYEARPSVPYGEKQEALTVMQAANR
RAELEGIAREIHALVREKGYRYKDVAILARQTEDYKDMVKEVFADYEIPYFIDGKASMLNHPLIEFIRSSIDVLKGNWRY
EAVFRCVKTELLFPLNEPKAKVREQVDQLENYCIAYGIKGDRWTKGDRFHYRRFVSLDDDFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQERAEALYRYLEETDVPLKLDQERQRAEEDGRIIEAQQHQQAWDAVIQLLEEFVEMMGDDEI
SLDLFQQMMEAGAESLTFSLIPPALDQVFVGNMDLSRMYGTACTFVLGANDGVLPARPDENGVLSDDDREWLKTIGIELS
SGGRERLLDEHFLIYMAFSSPSDRLYVSYPIADAEGKTLLPSIVIKRLEELFPQHKERLLTNEPEQVSDEEQLKYVVNKS
VAQSFTASQLRLWTREYDISDVWWSTYNVLMSEPDRLQSKKLFSSLFFRNEVKQLDRGVSRQLYGERIQGSVSRMESFNA
CPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDRLREQKLDWRDLTKEQCELFSFDAVERLAPKLQKEILLSSN
RHYYVKEKLQKIVTRVSGILSEHAKASGFVPIGLELGFGGKGPLPPLTFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFHIHDPMIQSNLPLGLDEIEQEIFKKFKMKGL
LLGDQEAVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAVGEKEFELLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTP
CTYCSFKSVCQFDESLEENEYRPLKAEKDKTILEWIKKEADGNEHS

Nucleotide

• Length: 3501 bp

>NTDB_id=1022010 ABZM97_RS05895 WP_253268994.1 1185728..1189228(+) (addB) [Bacillus vallismortis strain BL-01]
TTGGGAGCAGAGTTTTTAGTAGGCAGGTCCGGGAGTGGAAAAACGAAGCTGATCATCGACAGCATTCAGGATGAACTGCG
CCGGGCTCCATTCGGGAAACCGATCATTTTTCTAGTCCCGGATCAAATGACGTTTTTAATGGAATACGAGCTTGCTAAAA
CGCCTGATATGGGCGGAATGATACGTGCTCAAGTGTTCAGTTTTTCACGATTGGCCTGGCGCGTTCTCCAGCATACGGGA
GGAATGAGCAGGCCGTTTCTTACGAGCACAGGCGTACAGATGCTCCTGCGGAAGCTCATTGAGGAGCATAAACAGGAGTT
TAAAGTCTATCAAAAAGCGAGTGACAAAAGCGGGTTTACCGCACAGGTAGAGCGCATGCTGACAGAGTTTAAGCGTTACT
GTCTGGAACCGGAAGATATCCGCCGGATGGCGGAAAGCGGAACGGCTTCCGAGTATCGCGGGGAACGTGTTTTATCTGAA
AAGCTTCATGACTTATCGATTCTGTATCAGCAGATGGAAAAAAGCCTTTCAGACCAATATCTTCACTCTGAGGATTATTT
GACATTGCTGTCAGAGCATATCCCGCTTGCGGAAGATATAAAAGGCGCGCATATCTATGTGGACGGCTTTTATCAGTTTA
CACCGCAGGAATTCAGGGTGTTGGAGCAGCTTATGGTTCATGCAGAGCATATCACGTTTTCGCTGACAGCGGACAAGCCG
TCATATGAGCGGGAGCCGCATGAACTGGAATTGTTCAGAATGACGGGAAAAGCCTATTACCGCCTTCATCAGAAGGCGAA
GGAACTGAATCTGGACATCACCTATAAAGAGCTAAACGGAACTGAGCGGCATACGCAGGCGCCGGAACTGGCGCATCTAG
AGGCGCAGTATGAAGCGCGTCCGTCTGTCCCGTACGGAGAAAAACAAGAGGCCTTAACTGTGATGCAGGCCGCAAATAGA
CGAGCTGAGCTGGAAGGCATCGCCCGGGAAATTCACGCGCTTGTCAGAGAGAAGGGCTATCGCTATAAAGATGTAGCGAT
TCTTGCGCGCCAGACGGAAGACTATAAGGATATGGTGAAGGAAGTTTTCGCTGATTACGAGATTCCTTATTTCATTGACG
GAAAAGCATCTATGCTGAACCATCCGTTAATCGAATTTATCCGGTCGAGCATTGATGTTCTGAAAGGGAATTGGCGTTAT
GAAGCGGTGTTTCGCTGCGTGAAAACCGAACTGCTATTCCCGCTTAACGAACCGAAGGCGAAGGTGAGAGAACAGGTCGA
TCAGCTTGAAAATTACTGTATCGCCTACGGTATTAAAGGCGACCGCTGGACAAAGGGCGACCGTTTCCACTACAGACGTT
TTGTATCATTGGATGATGATTTTGCGCAGACCGATCAGGAAATCGAAATGGAAAACATGCTGAATGACACACGCGACTGG
ATTGTTCCGCCGCTTTTTCAGCTCCAGAAACGAATGAAAAAAGCTAAGACAGTTCAGGAGAGGGCGGAGGCGCTTTACCG
TTATTTAGAGGAGACAGATGTGCCGCTGAAGCTGGATCAGGAGAGACAGCGCGCTGAGGAAGACGGCAGAATCATTGAAG
CGCAGCAGCATCAGCAGGCGTGGGATGCAGTCATCCAGCTGCTTGAGGAGTTTGTTGAAATGATGGGGGATGATGAGATT
TCTCTAGATTTGTTTCAGCAAATGATGGAAGCCGGCGCGGAGTCGCTCACATTTTCTCTTATTCCGCCTGCGCTTGACCA
GGTGTTTGTCGGCAATATGGATTTATCCAGAATGTATGGCACCGCTTGCACCTTTGTGCTGGGGGCAAACGACGGCGTTC
TGCCGGCGCGCCCTGATGAAAACGGGGTGCTGTCGGACGATGACCGGGAATGGCTGAAAACCATAGGAATTGAACTTTCC
TCAGGCGGGCGGGAGCGTCTGCTTGATGAGCATTTCCTCATCTATATGGCGTTTTCCAGTCCGTCTGACCGGCTTTATGT
GTCGTATCCGATTGCTGATGCGGAAGGAAAAACGCTTTTGCCGTCGATTGTCATTAAGCGGCTGGAAGAGCTGTTTCCGC
AGCATAAGGAGCGCCTATTGACAAATGAACCTGAGCAGGTCAGCGATGAGGAACAGCTTAAGTATGTCGTCAATAAAAGC
GTGGCACAGTCCTTTACCGCAAGCCAGCTCAGATTATGGACTCGGGAATACGACATCAGCGACGTTTGGTGGAGCACGTA
CAATGTGCTAATGAGTGAGCCGGACAGGCTGCAATCGAAAAAGCTGTTCTCAAGCCTGTTTTTCCGGAATGAAGTGAAGC
AGCTTGATCGCGGCGTGTCGAGACAGCTCTATGGCGAACGCATTCAGGGCAGTGTATCGAGAATGGAAAGCTTTAACGCG
TGCCCATTCTCCCATTTTGCGTCACACGGGCTTCATCTGAAGGAACGGCAATTTTTCAAACTCGAAGCACCGGATATCGG
CCAGCTGTTTCATTCCAGCTTAAAGCTGATTTCAGACCGGCTGCGTGAGCAAAAGCTTGATTGGCGCGATTTAACGAAGG
AGCAGTGCGAGCTGTTTTCCTTTGATGCGGTAGAACGGCTGGCACCGAAACTGCAAAAGGAAATTTTGCTCAGCTCAAAC
CGGCATTATTATGTAAAGGAAAAGCTGCAAAAAATTGTGACCCGTGTGTCAGGCATTTTAAGCGAGCATGCGAAAGCGAG
CGGATTCGTGCCGATCGGGCTTGAACTGGGCTTTGGGGGAAAAGGGCCCCTTCCGCCGCTGACCTTTACACTGAAAAACG
GCTGCACGATGGAGCTCGTCGGGCGAATAGACCGTGTCGATAAAGCGGAAAGCTCAAAAGGCCTGCTCCTCAGGATTGTC
GATTATAAATCAAGCGACAAAGGCCTTGACTTAGCGGAAGTATATTACGGACTGGCGCTGCAAATGCTGACGTACCTTGA
CTTATCAATTACACATTCAGCCGACTGGCTCGGAATGAGAGCGACGCCGGCCGGAGTGCTGTATTTCCATATTCATGACC
CGATGATTCAATCTAATCTCCCGCTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCCTG
CTCCTCGGCGATCAGGAAGCGGTTCGCCTCATGGATACGACCCTTCAAGAGGGACGGTCAAATATCATTAACGCCGGCTT
GAAGAAAGACGGCTCTCTCAGGTCGGATTCAGCGGCAGTCGGCGAAAAGGAATTTGAGCTGTTGACGAAGCATGTGCGCC
GCACCTTCCAAGAAGCAGGCGAACAAATCACCGACGGACGTGTATCGATTGAGCCGTATAAAATGAAGAACAAGACGCCG
TGCACATACTGTTCGTTCAAATCAGTATGCCAATTTGATGAATCATTAGAAGAAAACGAGTATCGACCATTAAAGGCTGA
AAAGGACAAGACGATACTTGAGTGGATAAAAAAGGAGGCGGATGGCAATGAACATTCCTAA

Domains

Predicted by InterproScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (790-1131)

• UvrD-like helicase C-terminal domain (UvrD_C) (307-556)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
addB	Bacillus subtilis subsp. subtilis str. 168	97.256	100	0.973