Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   ABZM97_RS04710 Genome accession   NZ_CP160797
Coordinates   967807..968598 (+) Length   263 a.a.
NCBI ID   WP_087992612.1    Uniprot ID   -
Organism   Bacillus vallismortis strain BL-01     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 962807..973598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZM97_RS04680 (ABZM97_04680) - 963652..964683 (+) 1032 WP_087992607.1 iron chelate uptake ABC transporter family permease subunit -
  ABZM97_RS04685 (ABZM97_04685) - 964794..965675 (+) 882 WP_289346727.1 PhzF family phenazine biosynthesis isomerase -
  ABZM97_RS04690 (ABZM97_04690) - 965762..966346 (+) 585 WP_367387282.1 nitroreductase -
  ABZM97_RS04695 (ABZM97_04695) - 966385..966576 (-) 192 WP_087992610.1 YfhD family protein -
  ABZM97_RS04700 (ABZM97_04700) - 966643..966753 (-) 111 WP_003223230.1 YfhE family protein -
  ABZM97_RS04705 (ABZM97_04705) - 966807..967718 (-) 912 WP_367387283.1 TIGR01777 family oxidoreductase -
  ABZM97_RS04710 (ABZM97_04710) recX 967807..968598 (+) 792 WP_087992612.1 recombination regulator RecX Regulator
  ABZM97_RS04715 (ABZM97_04715) - 968606..968926 (+) 321 WP_289346731.1 YfhH family protein -
  ABZM97_RS04720 (ABZM97_04720) - 969064..970257 (+) 1194 WP_367387284.1 MFS transporter -
  ABZM97_RS04725 (ABZM97_04725) - 970290..970442 (-) 153 WP_010330867.1 small, acid-soluble spore protein K -
  ABZM97_RS04730 (ABZM97_04730) - 970567..970836 (+) 270 WP_087992615.1 YfhJ family protein -
  ABZM97_RS04735 (ABZM97_04735) - 970868..971251 (-) 384 WP_087992616.1 hypothetical protein -
  ABZM97_RS04740 (ABZM97_04740) - 971253..971465 (-) 213 WP_087992617.1 helix-turn-helix transcriptional regulator -
  ABZM97_RS04745 (ABZM97_04745) - 971657..972175 (+) 519 WP_087992618.1 SH3 domain-containing protein -
  ABZM97_RS04750 (ABZM97_04750) - 972260..972592 (+) 333 WP_202328255.1 SdpI family protein -
  ABZM97_RS04755 (ABZM97_04755) - 972579..973439 (+) 861 WP_202328254.1 alpha/beta fold hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30814.06 Da        Isoelectric Point: 7.0008

>NTDB_id=1022004 ABZM97_RS04710 WP_087992612.1 967807..968598(+) (recX) [Bacillus vallismortis strain BL-01]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSAPAIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRFDGSYESAMK
VKQFLFRKGFSLDLIEKFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1022004 ABZM97_RS04710 WP_087992612.1 967807..968598(+) (recX) [Bacillus vallismortis strain BL-01]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGAAAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTAAAATTTGAGCTCAAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGTGATGAAGTAAAAAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCAGCGCCTGCAATTGCGGAAGTCATCCATAAGCTCAACGACTATAAGTACCT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGGATCGACGACGATACAATTAAGGAGGCATTAAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCAGTGAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCTCAGATGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCTGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCCGAAAAAGCGTTTAGAAAATACCGCTTTGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGAAATTTCTGCAAGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.198

100

0.962


Multiple sequence alignment