Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ABZM97_RS02055 Genome accession   NZ_CP160797
Coordinates   397160..397300 (+) Length   46 a.a.
NCBI ID   WP_250621922.1    Uniprot ID   -
Organism   Bacillus vallismortis strain BL-01     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 392160..402300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZM97_RS02050 (ABZM97_02050) srfAB 394024..397116 (+) 3093 Protein_360 surfactin non-ribosomal peptide synthetase SrfAB -
  ABZM97_RS02055 (ABZM97_02055) comS 397160..397300 (+) 141 WP_250621922.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5246.08 Da        Isoelectric Point: 8.5244

>NTDB_id=1021999 ABZM97_RS02055 WP_250621922.1 397160..397300(+) (comS) [Bacillus vallismortis strain BL-01]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATMSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1021999 ABZM97_RS02055 WP_250621922.1 397160..397300(+) (comS) [Bacillus vallismortis strain BL-01]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAATGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

95.652

100

0.957

Multiple sequence alignment