Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ABZM97_RS02020 | Genome accession | NZ_CP160797 |
| Coordinates | 378423..378872 (-) | Length | 149 a.a. |
| NCBI ID | WP_289346437.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain BL-01 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 373423..383872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZM97_RS01980 (ABZM97_01980) | - | 373700..373927 (+) | 228 | WP_087993162.1 | hypothetical protein | - |
| ABZM97_RS01985 (ABZM97_01985) | - | 373948..374370 (+) | 423 | Protein_347 | RDD family protein | - |
| ABZM97_RS01990 (ABZM97_01990) | - | 374487..374819 (+) | 333 | WP_087993163.1 | YckD family protein | - |
| ABZM97_RS01995 (ABZM97_01995) | - | 374955..375377 (+) | 423 | WP_202328833.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| ABZM97_RS02000 (ABZM97_02000) | - | 375365..375706 (+) | 342 | WP_087993165.1 | DUF3147 family protein | - |
| ABZM97_RS02005 (ABZM97_02005) | - | 375726..376454 (+) | 729 | WP_087993166.1 | AAA family ATPase | - |
| ABZM97_RS02010 (ABZM97_02010) | bglC | 376527..377960 (+) | 1434 | WP_087993167.1 | 6-phospho-beta-glucosidase | - |
| ABZM97_RS02015 (ABZM97_02015) | nin/comJ | 377997..378395 (-) | 399 | WP_087993168.1 | competence protein ComJ | Regulator |
| ABZM97_RS02020 (ABZM97_02020) | nucA/comI | 378423..378872 (-) | 450 | WP_289346437.1 | DNA-entry nuclease | Machinery gene |
| ABZM97_RS02025 (ABZM97_02025) | tlpC | 379046..380770 (-) | 1725 | WP_367387154.1 | methyl-accepting chemotaxis protein TlpC | - |
| ABZM97_RS02030 (ABZM97_02030) | hxlB | 380884..381441 (-) | 558 | WP_087993170.1 | 6-phospho-3-hexuloisomerase | - |
| ABZM97_RS02035 (ABZM97_02035) | hxlA | 381446..382078 (-) | 633 | WP_087993171.1 | 3-hexulose-6-phosphate synthase | - |
| ABZM97_RS02040 (ABZM97_02040) | hxlR | 382309..382671 (+) | 363 | WP_087993172.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16428.49 Da Isoelectric Point: 4.5022
>NTDB_id=1021998 ABZM97_RS02020 WP_289346437.1 378423..378872(-) (nucA/comI) [Bacillus vallismortis strain BL-01]
MNITMDIIKTLLLVIVVIAAAVVGLIKGDFFPTDQKTSQTKEYDETIALPSNRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFAIQ
MNITMDIIKTLLLVIVVIAAAVVGLIKGDFFPTDQKTSQTKEYDETIALPSNRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFAIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1021998 ABZM97_RS02020 WP_289346437.1 378423..378872(-) (nucA/comI) [Bacillus vallismortis strain BL-01]
GTGAACATCACGATGGACATCATAAAAACTTTACTTCTCGTCATCGTCGTCATAGCAGCTGCAGTTGTCGGCCTGATAAA
GGGGGACTTTTTCCCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGACGAAACAATCGCCCTCCCTTCCAACCGTT
ATCCCGAAACAGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCAGATGTGTGCACCATCGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAAGACGTACCTCCTAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGGGCTTCTGTAGAATATATTTCTCCCGCTGACAACCGCGGTGCAGGCTCTTGGGTTGGGCATC
AGCTTACCGATTATCCCGACGGCACAAAGGTTTTATTCGCAATTCAGTAA
GTGAACATCACGATGGACATCATAAAAACTTTACTTCTCGTCATCGTCGTCATAGCAGCTGCAGTTGTCGGCCTGATAAA
GGGGGACTTTTTCCCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGACGAAACAATCGCCCTCCCTTCCAACCGTT
ATCCCGAAACAGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCAGATGTGTGCACCATCGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAAGACGTACCTCCTAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGGGCTTCTGTAGAATATATTTCTCCCGCTGACAACCGCGGTGCAGGCTCTTGGGTTGGGCATC
AGCTTACCGATTATCCCGACGGCACAAAGGTTTTATTCGCAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
90.604 |
100 |
0.906 |