Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB1723_RS10210 Genome accession   NZ_CP160633
Coordinates   2184477..2184878 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas cyclobalanopsidis strain Ed1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2179477..2189878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1723_RS10195 (AB1723_10190) - 2181489..2183525 (-) 2037 WP_150455357.1 methyl-accepting chemotaxis protein -
  AB1723_RS10200 (AB1723_10195) - 2183567..2184097 (-) 531 WP_200753466.1 chemotaxis protein CheW -
  AB1723_RS10205 (AB1723_10200) - 2184097..2184459 (-) 363 WP_108769692.1 PleD family two-component system response regulator -
  AB1723_RS10210 (AB1723_10205) pilG 2184477..2184878 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  AB1723_RS10215 (AB1723_10210) gshB 2185119..2186066 (+) 948 WP_367380082.1 glutathione synthase -
  AB1723_RS10220 (AB1723_10215) - 2186066..2186950 (+) 885 WP_367380083.1 energy transducer TonB -
  AB1723_RS10225 (AB1723_10220) tsaB 2187457..2188170 (-) 714 WP_367380084.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=1021727 AB1723_RS10210 WP_005418455.1 2184477..2184878(-) (pilG) [Stenotrophomonas cyclobalanopsidis strain Ed1]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1021727 AB1723_RS10210 WP_005418455.1 2184477..2184878(-) (pilG) [Stenotrophomonas cyclobalanopsidis strain Ed1]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGACTCGAAGACCATTCGCCG
GACTGCGGAAACGCTGCTGAAGCGCGAAGGCTGCGAAGTGGTGACCGCGACCGATGGCTTCGAGGCCTTGGCCAAGATCG
CCGACCAGCAGCCACAGATCATCTTCGTGGACATCATGATGCCCCGTCTCGACGGGTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCAACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGACGCAT
CGTCGGCTCGGAACAGTACCTGACCAAGCCTTTCACGCGGGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment